Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g04759 ATGGCAGGTGATCAGGTACTGAAAAAGGGGGAAACTCTGAGTCTGAAAATCACTGGCAAAAGCCATGTGAAACCTGAGGAGAAGATTGGAAGGAAAGAGTGTCAACTTGTCACTTTTGATCTTCCCTACCTAGCTTTCTACTACAACCAAAAGCTACTTTTTTACAAAGGGGATGACTTTGAGGGTATGGTTAAGAAACTCAAAGATGGGCTTAGTGTAGTCCTAAAAGAGTTCCATCAACTAGCTGGTAAGTTAGGGAAAGATGAAGAGGGTGTGTTCATGGTGGAATATGATGATGACATGCTTGGTGTTGAGGTCATAGAAGCAGTTGCTGATGAGTTTGGTGTAGAAGATCTCACTGTGGCAGAGAGTACCAGCATTTTGAAGGAGCTTATACCTTATAGTGGAATCTTGAATTTGGAAGGCATGCACAGGCCCTTGCTTGCAGTTCAGTTAACTCAGCTCAAAGACGGGCTCGCGATGGGCTTGGCGTTCAACCATGCTATCCTAGATGGGACTTCCACGTGGCACTTCATGAGTTCATGGGCTGAGATCTGCAGCGGTTCACCCTCCACAACAGCCCAACCCTTCCTTGAACGGACCAAAGCCCGAAACACGCGTGTGAAGCTTGACCTATCTCCACCCGACGCATCAAATGGGGAGCCAAAGCCCGAGCCCGTACTCAGGGAAAAGATCTTTAAATTCTCCGAGGCAGCCATCGACAAGATCAAGTCAACGGTCAACGAAATCCTTCCATCGGATGGTTCAAAACCATTCTCAACCTTTCAAGCTCTCTCCACTCATATTTGGCGTCATGTAACCCATGCACGCGACCTAAAACCTGAAGACTACACCGTTTTCACCGTCTTTGTGGATTGTCGGAAGCGGGTGGACCCACCGATGCCAGAGGCGTATTTTGGAAACCTAATTCAGGGCATATTCACTGTCACAGCGGCCGGGCTTTTGTCGGCCCACCCACCACAATTCGGTGCTTCTTTGATCCAGAAAACCATTGAGGCACATGATGCAAAAGCTATTGATGGACGTAACAAGGAATGGGAGAGTGCACCAAAGATTTTTCAGTTCAAAGATGCTGGGGTGAATTGTGTGGCAGTGGGAAGTTCACCAAGGTTTAAGGTTTATGACATTGATTTTGGATGGGGGAAGCCCGAGAATGTGAGGAGTGGGACTAATAATAAGTTTGATGGGATGATTTATTTGTACCCAGGAAAGAGTGGAGGGAGGAGCATTGATGTGGAGCTAACCTTGGAGCCTGAGGCTATGGGGAGGTTGGAGCAAGACAAGGAGTTTCTTATGGAGATATAA 1326 0.4713 MAGDQVLKKGETLSLKITGKSHVKPEEKIGRKECQLVTFDLPYLAFYYNQKLLFYKGDDFEGMVKKLKDGLSVVLKEFHQLAGKLGKDEEGVFMVEYDDDMLGVEVIEAVADEFGVEDLTVAESTSILKELIPYSGILNLEGMHRPLLAVQLTQLKDGLAMGLAFNHAILDGTSTWHFMSSWAEICSGSPSTTAQPFLERTKARNTRVKLDLSPPDASNGEPKPEPVLREKIFKFSEAAIDKIKSTVNEILPSDGSKPFSTFQALSTHIWRHVTHARDLKPEDYTVFTVFVDCRKRVDPPMPEAYFGNLIQGIFTVTAAGLLSAHPPQFGASLIQKTIEAHDAKAIDGRNKEWESAPKIFQFKDAGVNCVAVGSSPRFKVYDIDFGWGKPENVRSGTNNKFDGMIYLYPGKSGGRSIDVELTLEPEAMGRLEQDKEFLMEI. 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g04759 441 Gene3D - 14 212 IPR023213 -
Seca9g04759 441 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 17 438 - -
Seca9g04759 441 Gene3D - 213 434 IPR023213 -
Seca9g04759 441 Pfam Transferase family 14 437 - -
Seca9g04759 441 FunFam Tryptamine hydroxycinnamoyl transferase 215 435 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g04759 Seca-Chr9 133818687 133822470 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g04759 67 441 Monolignol Biosynthesis Gene Families AT5G48930 28.463 9.28e-35 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g04759 K19747 - gmx:100790669 763.837