Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g04724 ATGAGACCCATTGCCATTGCTTTTTCGATGAAGGAAGATAACATCAACATTGATTTCAATAAGGATGGAGATGGTGGAGAAGAAGGAGAGGTTCCTGATATGGTTGGGGCAATGGCAAAGCCAGCTCGTCCTTTTTACAATGCGTTTGAGATCATTTCGTCTTTGTCACATGGTTTCGAACTTAGGAGCTTGTTTGAGACGAGGAAGCGATCCCTGTCTTTGTTCATATCCAAGTTTTCGGCTTCGGCGGTGGTGGAGAAGCTTGGGGAGGTGGCAAAGAAGCTCAGGTTTAGGATAACAGGGAAGAAAGAGTTCATGGTGAGGATGCAGGGGATGAAAGAAGGGAGGAAGGGGAAGCTGGCCATGACGGTGGAGGTTTTTGAGGTGGTGCCGGAGGTGGCAATGGTTCAGTTTTCTGTCACACCTTAA 429 0.4755 MRPIAIAFSMKEDNINIDFNKDGDGGEEGEVPDMVGAMAKPARPFYNAFEIISSLSHGFELRSLFETRKRSLSLFISKFSASAVVEKLGEVAKKLRFRITGKKEFMVRMQGMKEGRKGKLAMTVEVFEVVPEVAMVQFSVTP. 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g04724 142 Pfam NAF domain 45 100 IPR004041 GO:0007165
Seca9g04724 142 Gene3D Kinase associated domain 1, KA1 42 141 - -
Seca9g04724 142 CDD CIPK_C 47 124 - -
Seca9g04724 142 ProSiteProfiles NAF domain profile. 41 66 IPR018451 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g04724 Seca-Chr9 131923138 131923566 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g04724 39 139 CBL-interacting serine-threonine protein kinases AT5G10930 49.020 1.06e-27 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g04724 - - lja:Lj3g3v2118210.1 197.593