Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g04705 ATGTCACCAAATGCATCATCATTGTCAATCATGAAACAAAAGCTCTCATTTTCAACCCCATTCCTTGGCATCCCATTATGGGTTTTGCTACTAGCTTCCACAGCAGCATTCATTGTTGCAGCATGTGTCATCATGTGTGTTTGCTTCATCTACTATCATCGTCAAAAATCCTACAAGCCCCGTTTTTCATTACCCAAATCAATAGCATGCAAGCACTACCGTGGTGTTTTTGGTTCTTCCTCCCTTGACAGGGGGTTACTATCAGCACCAAGCAATGTCTCAGAATTTGAGATTAACTTTGACAAGTTATCAGTATCAGGTCATCATGAGTTGTTCCAACCTGGCCAGTTTTATCCAAAGGTTAATATCATTAAAAAAGATGAATTTTTTAAAGGTTTTGAGTCAAGTGGTAAGCTCTCTCCTGTTGCCAAGGATGTGAAGAGGGAGTTTTATTTTAGCCTTAAGGAGATAGAGGATGCTACAAATGGATTGGCTCAAGAAAATGTCATTGGAAGTGGGGATAATGGGATTGTTTATCTTGGTTTGTTGCCAAATAATAGGAGGGTGGCAGTGAAGAAACTAGTTTGTGACAGTCGCCAACCTGAGGAATATTTTGCAAATCAAATGGAGGCAATTGGACGTGTAAAGCACAAGATGCTGGTTAAATTGCTTGGATATTGTACTGATGGTGCTTACAGGATGTCAGTAACTGAATATGTAGATAATGGAAATCTGCATTATTGGCTTCATGAGTTTCCTGGACTAGTCAGTCCTCTAACATGGACTATAAGATTAAGCATAATCCATGGTGTGGCAAAAGGACTGGCATATCTTCATGAGGAAGTAGAACCAAAGATTCTCCATGGCAACATAAAATCCAACAATATATTGCTTGACCATCAATGGAATGCAAAGATATCTGACTTTGGTCTTGTTAAGCTTCTCAGTCCTGAATGGAGTCACATTATAATGGAAACATTGGGTTATGTTGCTCCAGATTGTCATTCTACTAGTACCTTCACTGAGGGTAATGACATTTATGGTTTTGGAGTACTTATCATGGAGATTATATCAGGGAGGACGGCTTTAAATCACAGTCAACCCCAGGCTCATATAGTAGACTGGTTCAAATCAATGATTTCCAATGGAAAGATTTCTTATGTGGTGGATCCAAAATTGCCTGAAATTCCTCCTTCAAAGGAACTTAAACGATTTATTTTGGTTGCTCTAAGATGTGTGGATCCTGATGTGAATCCTAGAATTAAAATGGGAGATGTGGTTCACATGCTTGAGTCCAACTTACTTCTTTTTGATGAACACCAAATTGCCATGGAGCCTTGTGAACACAATCACTCTCCACAAAGTCAGCACTCAGCATGA 1380 0.3935 MSPNASSLSIMKQKLSFSTPFLGIPLWVLLLASTAAFIVAACVIMCVCFIYYHRQKSYKPRFSLPKSIACKHYRGVFGSSSLDRGLLSAPSNVSEFEINFDKLSVSGHHELFQPGQFYPKVNIIKKDEFFKGFESSGKLSPVAKDVKREFYFSLKEIEDATNGLAQENVIGSGDNGIVYLGLLPNNRRVAVKKLVCDSRQPEEYFANQMEAIGRVKHKMLVKLLGYCTDGAYRMSVTEYVDNGNLHYWLHEFPGLVSPLTWTIRLSIIHGVAKGLAYLHEEVEPKILHGNIKSNNILLDHQWNAKISDFGLVKLLSPEWSHIIMETLGYVAPDCHSTSTFTEGNDIYGFGVLIMEIISGRTALNHSQPQAHIVDWFKSMISNGKISYVVDPKLPEIPPSKELKRFILVALRCVDPDVNPRIKMGDVVHMLESNLLLFDEHQIAMEPCEHNHSPQSQHSA. 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g04705 459 Gene3D Phosphorylase Kinase; domain 1 130 239 - -
Seca9g04705 459 Pfam Protein kinase domain 166 427 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca9g04705 459 FunFam Putative receptor-like serine/threonine-protein kinase 240 444 - -
Seca9g04705 459 SUPERFAMILY Protein kinase-like (PK-like) 149 444 IPR011009 -
Seca9g04705 459 Gene3D Transferase(Phosphotransferase) domain 1 240 444 - -
Seca9g04705 459 ProSiteProfiles Protein kinase domain profile. 164 436 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca9g04705 459 PANTHER OS01G0323000 PROTEIN 9 444 - -
Seca9g04705 459 ProSitePatterns Protein kinases ATP-binding region signature. 170 193 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g04705 Seca-Chr9 131100028 131102718 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g04705 152 426 Trihelix Transcription Factor Family AT1G68690 39.437 1.29e-61 210
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Seca9g04705 Pkinase 4.3e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g04705 - - vra:106762086 581.252