Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g04703 ATGGAGGCTTCAACAAATTGCCGTATGAAGAAGCCTAGGTCGGAAATGAATGTTGATCCTGATGATCCAAAAACATGGTACATGCCTCGGTGGCAGTTCCTGGAGTATGATCCTCGAGTGGGATTTTGCAAAGCTGCTACTCAGTTTGCCAGGGACTTTTGGGACATTGTTCCTAGGCGGGTTCACTTTATTGACGGTATTGGAAACAATATCAATGTTGTTGTGCGAAAAGATGTTGACGCCATGTACTTTACTCATGGTTGGCCTTTGCTGAAAGATGTTTATGATCTTGATGATGGAGGCTGGATTAAGCTTTTTTATCATGATAAAGATGTTTTCAAGATTTTTGTGTTTGATAGGGATTTTATTCATGTTCATTTGCCTATTCCTCCAAAAGAATATGAACATGCTGTCACTTATATCCCGGAGGATATTATTCCTGGATATCGTGAAAGTGATCTTGCTGAAGTGCATTATTTTGATAAAACAATGACTAAAATGCATGCTAATGGTAGCACACTGAACCTTCCAACTGCCCTTTGTGAAAGATTTAGAACAAAGATAACCTCTGCTGTGTTGAGGGATGATAATGGTGTTGTCTTTCCCGTCAATCTGTCTTGGTCAAGGAATGGAAAGGTTGCATATATCACGAAGGGATGGAAACATTTTAGTATGCAAAACAATTTGAAGAAAGATTCAGTGGTTCGTTTCAGAGTTGACACTGTTGATTGCCAAATCATTCATACTTGGATTCTATATTAA 762 0.3885 MEASTNCRMKKPRSEMNVDPDDPKTWYMPRWQFLEYDPRVGFCKAATQFARDFWDIVPRRVHFIDGIGNNINVVVRKDVDAMYFTHGWPLLKDVYDLDDGGWIKLFYHDKDVFKIFVFDRDFIHVHLPIPPKEYEHAVTYIPEDIIPGYRESDLAEVHYFDKTMTKMHANGSTLNLPTALCERFRTKITSAVLRDDNGVVFPVNLSWSRNGKVAYITKGWKHFSMQNNLKKDSVVRFRVDTVDCQIIHTWILY. 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g04703 253 SUPERFAMILY DNA-binding pseudobarrel domain 156 242 IPR015300 -
Seca9g04703 253 Gene3D - 150 251 IPR015300 -
Seca9g04703 253 SUPERFAMILY DNA-binding pseudobarrel domain 47 121 IPR015300 -
Seca9g04703 253 Pfam B3 DNA binding domain 160 243 IPR003340 GO:0003677
Seca9g04703 253 CDD B3_DNA 158 238 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g04703 Seca-Chr9 130982074 130983544 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Seca9g04703 B3 9.6e-11 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g04703 - K00433 ahf:112803777 60.077