Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g04700 ATGGAGGCTTCAACAAATTGCCGTATGAAGAAGCCTAGGTCGGAAATGAATGTTGATCCCGATGATCCAAAAACATGGTACATGCCTCGGTGGCAGTTTCTGGAGTATGATCCTCGAGTGGGATTTTGCAAAGCTGCTACTCAGTTTGCCAGGGACTTTTGGGACATTGTTCCTAGGCGGGTTCACTTTATTGACGGTATTGGAAACAATATCAATGTTATTGTGCGAAAAGATGTTGACGCCATGTACTTTACTCATGGTTGGCCTTTGCTGAAAGATGTTTATGATCTTGATGATGGAGGCTGGATTAAGCTTTTTTATCATGATAAAGATGTTTTCAAGATTTTTGTGTTTGATAGGGATTTTATTCATGTTCATTTGCCTATTCCTCCAAAAGAATATGAACATGCTGTCACTTATATCCCGGAGGATATTATTCCTGGATATCGTGAAAGTGATCTTGCTGAAGTGCATTATTTTGATAAAACAATTACTAGAATGCATGCTAATGGTAGCACACTGAACCTTCCAACTGCCCTTTGTGAAAGATTTAGAACAAAGATAACCTCTGCTGTGTTGAGGGATGATAATGGTGTTGTCTTTCCCGTCAATCTGTCTTGGTCAAGGAATGGAAAGGTTGCATATATCACGAAGGGATGGAAACATTTTAGTATGCAAAACAATTTGAAGAAAGATTCAGTGGTTCGTTTCAGAGTTGACACTGTTGATTGCCAAATCATTCATACTAGGATTCTATATTAA 762 0.3871 MEASTNCRMKKPRSEMNVDPDDPKTWYMPRWQFLEYDPRVGFCKAATQFARDFWDIVPRRVHFIDGIGNNINVIVRKDVDAMYFTHGWPLLKDVYDLDDGGWIKLFYHDKDVFKIFVFDRDFIHVHLPIPPKEYEHAVTYIPEDIIPGYRESDLAEVHYFDKTITRMHANGSTLNLPTALCERFRTKITSAVLRDDNGVVFPVNLSWSRNGKVAYITKGWKHFSMQNNLKKDSVVRFRVDTVDCQIIHTRILY. 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g04700 253 ProSiteProfiles B3 DNA-binding domain profile. 159 253 IPR003340 GO:0003677
Seca9g04700 253 SUPERFAMILY DNA-binding pseudobarrel domain 47 121 IPR015300 -
Seca9g04700 253 CDD B3_DNA 158 238 IPR003340 GO:0003677
Seca9g04700 253 Gene3D - 150 252 IPR015300 -
Seca9g04700 253 Pfam B3 DNA binding domain 162 243 IPR003340 GO:0003677
Seca9g04700 253 SUPERFAMILY DNA-binding pseudobarrel domain 156 243 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g04700 Seca-Chr9 130814550 130816021 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Seca9g04700 B3 3e-10 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g04700 - K00433 ahf:112803777 54.299