Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g04697 ATGGAGGCTTCAACAAATTCCCGTATGAAGAAGCCTAGGTCGGAAATGAATGTTGATCCTGATGATCCAAAAACATGGTACATGCCTCGGTGGCAGTTTCTGGAGTATGATCCTCGAGTGGGATTTTGTATAGCTGCTGCTCAGTTTGCCAGGGACTTTTGGGACATTGTTCCTAGGCAGGTTCATTTTATTGACGGTATTGGAAACAATATCAATGTTGTTGTGCGAAGAGATGTTGACGACATGTACTTTACTCATGGTTGGCCTTTGCTGAAAGATGTTTATGATCTTGATGATGGAGGCTGGATTAAGCTTTTTTATCATGATAAAGATGTTTTCAAGATTTTTGTGTTTGATAGGGATTTTATTCATGTTCATTTGCCTATTCCACCAAAAGAATATGAACATATTGTCACTTATATCCCGGAGGATATTATTCCTGGATATCGTGAAAGTGATTTTGCTGATGTGCACTATTTTGATAAAACAATGACTAAAATGCATGCTAATGGTAGAACACTGAACCTTCCAACTGCCCTTTGTGAAAGATTTAGAACAAAGATAACCTCTGCTGTGTTGAGGGATGATAATGGTGTTGTCTTTCCTGTCAATCTGTCTTGGTCAAGGAATGGAAAGGTTGCATATATCACAAAGGGATGGAAACAATTTAGTATGCAAAAGAATTTGAAGAAGGATTCAGTGGTTCGTTTCAGAGTTGACATTGTTGATTGCCAAATCATTCATACTAGGGTTCTATGTTAA 762 0.3806 MEASTNSRMKKPRSEMNVDPDDPKTWYMPRWQFLEYDPRVGFCIAAAQFARDFWDIVPRQVHFIDGIGNNINVVVRRDVDDMYFTHGWPLLKDVYDLDDGGWIKLFYHDKDVFKIFVFDRDFIHVHLPIPPKEYEHIVTYIPEDIIPGYRESDFADVHYFDKTMTKMHANGRTLNLPTALCERFRTKITSAVLRDDNGVVFPVNLSWSRNGKVAYITKGWKQFSMQKNLKKDSVVRFRVDIVDCQIIHTRVLC. 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g04697 253 SUPERFAMILY DNA-binding pseudobarrel domain 156 240 IPR015300 -
Seca9g04697 253 SUPERFAMILY DNA-binding pseudobarrel domain 47 121 IPR015300 -
Seca9g04697 253 CDD B3_DNA 158 238 IPR003340 GO:0003677
Seca9g04697 253 Gene3D - 150 251 IPR015300 -
Seca9g04697 253 Pfam B3 DNA binding domain 160 240 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g04697 Seca-Chr9 130570827 130572317 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Seca9g04697 B3 5.2e-10 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g04697 - K11839 tpra:123886137 55.0694