Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca9g04664 | ATGTGCCTTAGGAACTTATTTGCAGCATCTTTGAGGGGAAATAACTCGGGAATGGTTCCATGTTTGGGAGACACTAATTGTCCTAGAATTTGGTACTCTCTCCAGATAAATTGTGGTGGAAAGCTCATAACTTCTAATGAAAGCATGACATATGAAGATGATTCATATGAAACCGGACCTGCAACATCTTACCGGACTGGATCAACCTGGGCAGTTAGCAACACAGGTCACTTCTTTGATAGCGGCCTCAAAGAAGACTACTATACCTGGTCTAATTCAACTAAGCTTGCTATGGACAATGGTGAATTGTATATGGATGCACGTGCTTCTCCCATTTCTCTCACATATTATGGATTTTGCTTGGGAAATGGAAACTACACAGTAAATCTCCATTTTGCTGAGATAATGTTCACTAATGATCAAACATATTCCAGCCTTGGAAGGCGTGTATTTGACATATATATTCAGAGGAAGTTAGTGCTGAAGGATTTCAATATTGCAAAAGAAGCAGGAGGAGTTGGTAAGGCAATCATAAAAAAGTTCACTGCTACTGTGGCTAGTAATACATTGGAGATCCGCTTTCATTGGGCTGGGAAAGGGACAACTAGTATCCCATTTGGATCGGTATATGGTCCTCTTATATCAGTTATATCTGTTGATCCTGACTTTACACCCCCATTGGAAAATGGAAGAAGCATACATGTGCGATCTATTGTTGCAATTGTAGTTGTTGGAGCACTTGTTATCATCATAGTATTTGGTATAGCTTGGTGGAGAGGATGTCTACGACTGAAAAGTTCATTAGAAAGAGACCTAAGGGGTTTAGATTCACAAACTAGCTTATTTACCTTACGGCAAATCAGAGCAGCAACTAACAACTTTGATACTACCTTTAAGATTGGAGAAGGAGGGTTTGGTCCTGTTTACAAGGGTGTTCTTTTAGATGGCACCGTCATAGCAGTTAAGCAGCTTTCTTCTAAATCAAATCAAGGGAATCGTGAATTTATAAATGAGATTGGAATTATTTCTGCTTTGCAACACCCTTGCCTAGTTAAGCTCTATGGTTGTTGTATGGAGGGAGATCAGTTGTTGTTGATATATGAATACATGGAAAACAATAGCCTTGCTCGTGCTTTGTTTGGTAATTTTTTTTCTTTGTATTCAAGAAATGAAGCCCGAGAAACAGGTCAATTGATGTTGGATTGGTCAACAAGGAAGAGGATTTGTGTTGGTATTGCTAGAGGTTTGGCCTACCTCCATGGAAAATCAATGTTAAAGATAGTTCACAGGGACATCAAGGCCACTAATGTGTTACTTGATAAAGATCTCAATCCAAAGATATCTGATTTTGGCTTGGCCAAGCTCAAAGAAGAGGGCTATACCCATATAACCACCAGAGTAGCTGGCACTTATGGATATATGGCTCCTGAGTATGCAATGCATGGTTATTTGACTGAGAAAGCAGATCTATATAGTTTTGGAGTCGTTGCCTGGGAAATTGTTAGTGGAAAGAGCAACACCATGAATTGGCCAAAGGAAGAATGCTTCTCTCTTGTTGATTGGGTGCATATCTTGAAAGAAGAAGGTAATATAATGGACCTAGTTGATGAGAGGTTGGGTGATGACTTCAGAAAAGAGGAAGTAATGGTCATGATCAATGTGGCCCTTCTATGCACACAAATTTCTCCAATGCAAAGGCCCACCATGTCCTCAGTGGTAAGCATGCTTGAAGGCAAAACTATTGTTCAAGAGGTGGTGCCTGTAACGTCCTAA | 1773 | 0.4005 | MCLRNLFAASLRGNNSGMVPCLGDTNCPRIWYSLQINCGGKLITSNESMTYEDDSYETGPATSYRTGSTWAVSNTGHFFDSGLKEDYYTWSNSTKLAMDNGELYMDARASPISLTYYGFCLGNGNYTVNLHFAEIMFTNDQTYSSLGRRVFDIYIQRKLVLKDFNIAKEAGGVGKAIIKKFTATVASNTLEIRFHWAGKGTTSIPFGSVYGPLISVISVDPDFTPPLENGRSIHVRSIVAIVVVGALVIIIVFGIAWWRGCLRLKSSLERDLRGLDSQTSLFTLRQIRAATNNFDTTFKIGEGGFGPVYKGVLLDGTVIAVKQLSSKSNQGNREFINEIGIISALQHPCLVKLYGCCMEGDQLLLIYEYMENNSLARALFGNFFSLYSRNEARETGQLMLDWSTRKRICVGIARGLAYLHGKSMLKIVHRDIKATNVLLDKDLNPKISDFGLAKLKEEGYTHITTRVAGTYGYMAPEYAMHGYLTEKADLYSFGVVAWEIVSGKSNTMNWPKEECFSLVDWVHILKEEGNIMDLVDERLGDDFRKEEVMVMINVALLCTQISPMQRPTMSSVVSMLEGKTIVQEVVPVTS. | 591 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca9g04664 | 590 | Pfam | Malectin domain | 33 | 216 | IPR021720 | - | |
Seca9g04664 | 590 | ProSiteProfiles | Protein kinase domain profile. | 294 | 586 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca9g04664 | 590 | CDD | STKc_IRAK | 300 | 578 | - | - | |
Seca9g04664 | 590 | SUPERFAMILY | Protein kinase-like (PK-like) | 277 | 578 | IPR011009 | - | |
Seca9g04664 | 590 | Gene3D | - | 32 | 220 | - | - | |
Seca9g04664 | 590 | Pfam | Protein tyrosine and serine/threonine kinase | 299 | 575 | IPR001245 | GO:0004672|GO:0006468 | |
Seca9g04664 | 590 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 427 | 439 | IPR008271 | GO:0004672|GO:0006468 | |
Seca9g04664 | 590 | SMART | serkin_6 | 294 | 576 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca9g04664 | 590 | FunFam | probable LRR receptor-like serine/threonine-protein kinase At1g53430 | 263 | 369 | - | - | |
Seca9g04664 | 590 | Gene3D | Phosphorylase Kinase; domain 1 | 261 | 369 | - | - | |
Seca9g04664 | 590 | FunFam | Putative LRR receptor-like serine/threonine-protein kinase | 370 | 587 | - | - | |
Seca9g04664 | 590 | Gene3D | Transferase(Phosphotransferase) domain 1 | 370 | 585 | - | - | |
Seca9g04664 | 590 | FunFam | Putative leucine-rich repeat receptor-like serine/threonine-protein kinase | 31 | 222 | - | - | |
Seca9g04664 | 590 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED | 22 | 585 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca9g04664 | Seca-Chr9 | 129919714 | 129925395 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca9g04664 | 19 | 586 | Receptor kinase-like Gene Family | AT1G07650 | 57.118 | 0.0 | 656 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_DLSV | Seca9g04664 | PK_Tyr_Ser-Thr | 1.5e-47 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca9g04664 | - | - | gmx:100786496 | 926.776 |