Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g04661 ATGTGGTGCAGTGACCTCACGCGCAACTACCTTAATGGTACAATCCCTCCACGATGGGGCTCCATGAACATTGTCAACACGTATTTTCTCCCTCACCCTTTCTCTGATTCCCTGTATAGTCCATTTCTTATGGCATGTTTCAATCCTGAAAATGAGGAGTATCAAAGTGTATGTCGTGTGATGTCTGGGTTCTCAGATTCATTTTATATAGAGATTGGGAGTAGGTGGAGTTGGAGCAGAAACTATGCAGCCAAAGACATTAGATTTGGGGTGGAGGCTCAGGCTCTGATGCTTAAGGGTGTTGAAGAGTTTACTGATTCTGTCAAAGGGAATGTGGGTCCTAAGAGTTGTATAGGGAAACATAGGATTTCATTTAGGATTCAAGTCAAACATAGGCATTTATATGTCTATGGAACATGGGTTTTCTTCATACCATGGAGAGGACAAATGCCATGGAGTGATGATGATGACGATGAGTCATCAGCAGATGAGTCATCAACTAATCATCTTTACAATTCAGACTCTGAACATGATATTGAAACTGGTGGGAAAAAATCCAATGGTATTTCATGTGCAACCGACAACATCTCTATCTAA 597 0.4137 MWCSDLTRNYLNGTIPPRWGSMNIVNTYFLPHPFSDSLYSPFLMACFNPENEEYQSVCRVMSGFSDSFYIEIGSRWSWSRNYAAKDIRFGVEAQALMLKGVEEFTDSVKGNVGPKSCIGKHRISFRIQVKHRHLYVYGTWVFFIPWRGQMPWSDDDDDESSADESSTNHLYNSDSEHDIETGGKKSNGISCATDNISI. 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g04661 198 SUPERFAMILY Nucleic acid-binding proteins 35 76 IPR012340 -
Seca9g04661 198 Gene3D - 25 108 IPR012340 -
Seca9g04661 198 MobiDBLite consensus disorder prediction 154 186 - -
Seca9g04661 198 PANTHER DNA LIGASE 1/3 FAMILY MEMBER 37 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g04661 Seca-Chr9 129888406 129894898 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g04661 38 74 Core DNA Replication Machinery Family AT1G08130 43.243 6.83e-06 44.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g04661 K04077 - sind:105171838 78.5666