Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g04606 ATGTCCTCCGAGATCTTCCAGGAGCTAGGATATCCTCAGGGCTGGCGTCCCTTCTGGGGACCCGCTGGAGTTCTTTGCAAAAACCCAGTGCACCCTTCCCAACCGATTTCACGATGTACCAAGTGTCACTGCCATATTAGGTCCACACCACGTGCACGCCACCGTCAATGGCGACAAGAAATTCGCAAGCAACTCCTCCACCGCCATTCAACTCCTCACCGTCAGCATTGTCGCATCTTTGCTTGTCCAGGTAAGTGCTCTTTCTCTTCAACCTCTTCGATTGCTTCATATTATTCGTGGTGGTTGGAGCGGAGCGGAGGTGGCGGTGGGTTGAAGCACACACGATGGCGCATATGGAAAACCGGGGCCGCGATGGTCACTGGACAGGGTGAATGTGCGATAGGGAGCGGTGGTTACGTGGCTGAGATGAGTATTTCAGGTGATGGTAGTTCGGTGCAGAGTGAGAGAAAGCACGACAGCGACCGCACAGTGACGTCTGGTGGCGTGACGTGCACAGCCGCAAGGAGCGGTGGAGGTTGGCGATACAGAGAGAGATATCAAAGCCACCAATATACTACATGCATATACAAGTGTTTTTTGGCCCAACTCATACTTGCTGACATGAATAAAGAACTCAAAGGATTAAGAATCACTGCTTTTGTATTCTGCTTGGTATCTTTCTCTGTGTTGGCTGCTGATAAGGAATGGGGTTGGGCTCAGGACTCTTTCTATTTGTACAAGGAATTCAGGTATAGCTTGTTAGTGACTGTGATTGGGTCTGTGTATTCTGGGTTGCAGGTCTATTACTTAGTAGTAGTATTCAAGTTCAACCGAAAGGATCCCCACTTGGCTCTTGATTTTAGCAACTCAGAAATTTGTGCAAATGTGTTTCATCGTGACTTGAAGCCAAAAAATATTCTAGCTAATGCTGATTGTAAACTAAAAATATGTGATTTTGGGCTTGCTAGAGTTTCATTTAATGAGGCTCCATCAGCTATATTCTGGACTAATTATTCCCTTGTTTCCATGGCTGTTGATCAGAGGAGGAAGCGAGTAAATGGTGCAAGTATTGTTGGTTATGGTTCTAGAGACCAACACAGGACCAAAAGGAAGAATTTAGGACTGCTTTGA 1131 0.4686 MSSEIFQELGYPQGWRPFWGPAGVLCKNPVHPSQPISRCTKCHCHIRSTPRARHRQWRQEIRKQLLHRHSTPHRQHCRIFACPGKCSFSSTSSIASYYSWWLERSGGGGGLKHTRWRIWKTGAAMVTGQGECAIGSGGYVAEMSISGDGSSVQSERKHDSDRTVTSGGVTCTAARSGGGWRYRERYQSHQYTTCIYKCFLAQLILADMNKELKGLRITAFVFCLVSFSVLAADKEWGWAQDSFYLYKEFRYSLLVTVIGSVYSGLQVYYLVVVFKFNRKDPHLALDFSNSEICANVFHRDLKPKNILANADCKLKICDFGLARVSFNEAPSAIFWTNYSLVSMAVDQRRKRVNGASIVGYGSRDQHRTKRKNLGLL. 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g04606 376 SUPERFAMILY Protein kinase-like (PK-like) 294 328 IPR011009 -
Seca9g04606 376 ProSiteProfiles Protein kinase domain profile. 140 376 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca9g04606 376 PANTHER CASP-LIKE PROTEIN 4A4 214 277 - -
Seca9g04606 376 Pfam Protein kinase domain 294 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca9g04606 376 Pfam Casparian strip membrane protein domain 214 279 IPR006702 -
Seca9g04606 376 Gene3D Transferase(Phosphotransferase) domain 1 294 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g04606 Seca-Chr9 127403861 127410068 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g04606 293 338 MAP Kinase Gene Family AT1G73670 91.304 5.59e-23 98.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Seca9g04606 DUF588 5.3e-12 CL0396
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g04606 - - cpap:110823385 99.3673