LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Seca9g04605	ATGAGTAATTTATCTGAACATAAGGAAGATGAGAATGATGGAAATGAAAATGAGGGAAGCGAAAATGAATTAAGTGAACGCATTTGTATAGATAACTTCCAGGACATTGTTAAAAACAATCTTGTATCTAAAAGTCCTGAGCAGATTATGTTGAAGTATGATTTTGTGAGTCTTGATATGGATTATGTGTTCTATAGTTGGTATGGGAGGTTTAACGGGTTTGCTGTCCGAAAAAGCAAGATAAGTTACAATTGTCGGAAGGAAGTTGTTGGTCGTGACTTTTTGTGCAACAAAGAGGGCAAATGGAGAAAACGAAATGATGATAGTGATTCAGAAGAAGAGCCCGAACGAGAGCCTAAACCGCAGACTAGGTGTGAGTGTAAAGCTAAATTTCGTGTGCATGTTGATTTTAATTCACGTCGGTGGTATGTGACGTGTTTTGACAATAGACATAATCATGAGCTGCTAGATGAAAAGTTTTTGGGTATGCTGCCAGCTCATAGAAATATGAGCGAAGGGGATATTATAGAGATGAATAATATGTTAAAGGCTGGTATAGGGGCTCCACAAATTTACAATTCATTTGCAAGCCAAGCAGAAGGGTATGAAAAGGTTGGTTTTTGGAAGAAAGACATGTACAACGAAATTGATAAACAAAGGAAGTTACGAAATGGTGATGCCATGGCTGCATTAGAATATCTAGGAGGTTTAGGGAAGAAGGATAAGAAATTGTTTTGTCGGTACACAATTGATGAAGAAGGAAGGCTTGAGCACTTATTCTGGTCTGATGGATATAGTCAGATGTGTTAG	810	0.3765	MSNLSEHKEDENDGNENEGSENELSERICIDNFQDIVKNNLVSKSPEQIMLKYDFVSLDMDYVFYSWYGRFNGFAVRKSKISYNCRKEVVGRDFLCNKEGKWRKRNDDSDSEEEPEREPKPQTRCECKAKFRVHVDFNSRRWYVTCFDNRHNHELLDEKFLGMLPAHRNMSEGDIIEMNNMLKAGIGAPQIYNSFASQAEGYEKVGFWKKDMYNEIDKQRKLRNGDAMAALEYLGGLGKKDKKLFCRYTIDEEGRLEHLFWSDGYSQMC.	270

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Seca9g04605	269	MobiDBLite	consensus disorder prediction	1	23	-	-
	Seca9g04605	269	PANTHER	OS01G0519700 PROTEIN	43	267	-	-
	Seca9g04605	269	MobiDBLite	consensus disorder prediction	102	122	-	-
	Seca9g04605	269	Pfam	FAR1 DNA-binding domain	64	156	IPR004330	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Seca9g04605	Seca-Chr9	127351693	127352502	Transposed

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	FAR1	Seca9g04605		FAR1	5.4e-18	CL0274

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Seca9g04605	-		-	tpra:123913749	249.21