Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g04599 ATGCACAATTGGATCTATTTTCGGAAAACCAAAGTGATGGCACTAAAGGAGAAAGGATTTGATGCAAAATTTCTCTCCTCAACAAAACCAGCAGATGTGAAAATTAAGGGACTTATGGAGCTTAAAAAACAATCTTTTAGTATAGGTGAAGTAAAATATATGATGCTTCAACTTCTTGAAGGTGTCAAGTATCTTCATGATAATTGGATTCTCCATAGGGACTTGAAGACATCAAATATTCTACTAAACAACAAAGGAGAGCTGAAAATATGTGACTTTGGATTGTCAAGGCAGTATGGAAGCCCATTGAAGCCATATACTCCTATTGTGGTTACACTGTGGTGTAGAGCACCTGAACTTTTATTAGGTGCTAAAAAATACTCAACAGCAATTGACATGTGGTCGGATAAGCATGGTGGAGTATTTTTTACTAGATTTTTCCATGATAAGGATAAGCATTCTCTGAAAGCTGACACATCTCCTTCCATCTTTAATCAACATAAACAAGGCCTTACTAGAGGCTTGTTTTTATAA 534 0.3577 MHNWIYFRKTKVMALKEKGFDAKFLSSTKPADVKIKGLMELKKQSFSIGEVKYMMLQLLEGVKYLHDNWILHRDLKTSNILLNNKGELKICDFGLSRQYGSPLKPYTPIVVTLWCRAPELLLGAKKYSTAIDMWSDKHGGVFFTRFFHDKDKHSLKADTSPSIFNQHKQGLTRGLFL. 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g04599 177 ProSitePatterns Serine/Threonine protein kinases active-site signature. 70 82 IPR008271 GO:0004672|GO:0006468
Seca9g04599 177 PANTHER CELL DIVISION PROTEIN KINASE 33 135 - -
Seca9g04599 177 ProSiteProfiles Protein kinase domain profile. 1 177 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca9g04599 177 SMART serkin_6 8 172 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca9g04599 177 Pfam Protein kinase domain 39 135 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca9g04599 177 SUPERFAMILY Protein kinase-like (PK-like) 42 135 IPR011009 -
Seca9g04599 177 Gene3D Transferase(Phosphotransferase) domain 1 38 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g04599 Seca-Chr9 127244749 127248556 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g04599 45 135 Core Cell Cycle Gene Families AT5G63610 54.639 8.77e-29 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-PITSLRE Seca9g04599 Pkinase 6.4e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g04599 K08818 - egr:104426183 185.267