Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g04596 ATGTCCGTAAAACTTAGTGATCCGGTTGAATACTTTAGAACATGCATATACCTGCCTCCCCGGGTGAATTCAGATATCCCATGGTGTAATTTAAAAGGTTCTAAGATGCTTCCAATAAATTCTTTGCCAATGTTGGAGATGCAGATGTGTCTGATCTTTCTTGGAACTCTTTTTTCCCATACAATTCTATGTCGTTTTGGAATCCCCAGATTCACTTCTATGAGCATTGTTGGCATAATCTTTGGAACTTCCTTCAATGAAACATGGGCTACTATGAGTGAGAGGCTGTTCTACTTTGATTCACAGGAGAATTTGGGGTTATTTTCATTGTTTGGTTTCATGCTTTTTATGTTCTACATTGGGGTCAAAACAGATATGAGTATGGTCTATAGGACTAGAAGGAGAGCCACCAACGTTGGTTCTATTGCCATAATGGCTCCCTTTCTATGTGGCATGGCTGTTCTGCGTTTTCACTCATCAAAATACCTAGATACAATAGATGCAACAAAACTTGGAATTGTCATTTCATTGTTAAGTGGAACCTCTTTCCCTGTTGTTTCCTCAGTTTTAGGTGACTTGAAGATCTTGAATTCAGAGCTGGGTCGATTAGGCCAATCCTCAGCACTAGTTAGTGAGATGTTCAATATATTCTTGACATCATTCCTGCAATTCATAAGGTTAATGATGCAATTTGGTGTACTAAGAGCCTTGATTTGTGTGTCAGCTACAATTTTGTTTGTATTCTTGGTTATGTTCATCATACGCCCAGCCATGTTTTGGATTATAAGACAAACACCAGAAGGTTCCCCTGTGAATGATCACCATGTATATTGCATACTCATAATGGCTCTTTTGTCATCATATGCTACACATCGCTTTGGATTCTCTGCTCTTATGGGGCCTTTTATTTTGGGTTTGGCTATTCCAGAAGGGCCTCCATTAGGCACTGCAATCATTAAAAAGATTGATACTTTTTGTTATGGAGTTTTGATTCCTATCTTTGTGACTACATGTGCAATGAGGGTAGATCTCACAGACTTCATGGTTTGGAAGAAGGAAGAGGATGGAAGAGTTGATGAATTCATGGTACAAACCTTGATTATTGTTGTAGTAACTTTTGTTGCCAAATTTGTTGCCTGTATGGTACCTCCTTTATGCAGTGAGATGCCATTGAATGATGCTGCATCTCTCTCTTTCGTTATGAGCTGCAAAGGCATAGTTGATATGGCTGGACTCTCCTTTTTCAGAGATGTCATAGGCTTACCTGATAATGTCTACGCTTTATTGATGATATACATCATAGTGAATGCCACATTCATGCAATTGCTCTTGGGTTTTTTCTACGACCCTATGAAGAAATACACAGGTTACACAAGGAGGAACATCATTGATCTCAGAAAGAACATGGAGCTTCGAGTTCTGACATGCATTCACAGGTCAGACAACATTCCCCCAACAATAAACCTGTTAGAGGCAACATACCCCACAAGAATGGAACCACTTTCTGTGTATGTGCTTCAACTCATAGAGCTAATTGGAAGAGCCTCCCCAGTTTTCATCTGCCACCAATTGCAAAGGAAGAAAAAAGCTGATTGCAACAGCTCCATGGCAGAGAAACTCCTTGATGCTTTCAAAAATTTTGAAAGAGAGTTCAATGATGCATTAATTGTGAACACTTTCACAGCTATCTCACCAGCTGAGATGATGTATGATGATATTTGCACTTTAGCACTTGACAGGTTCACATGCCTTATAGTCCTTCCCTTTCATAGAAAATGGTCATCAGATGGTAACTCCATTGAGCTAGAAGATGAGTCTTTAAGAGACTTAAACTACAGAGTTATGGAAAGAGCACCATGTTCTGTTGGTGTACTAATTGAGAGGGCACAAATGACACATATTTTCTCACCAGAGACACCTTACACTGTTTGTTTGCTTTTCATAGGAGGCAAAGATGATAGAGAGGCACTTTTCTTTGCCAAGAGAATGACCAAGAATCCACATGTTAGGCTCACTGTGGTGAGGTTCATAGCTTCTGTTGGAAACTCAAATGATTGGCAGACATTGCTTGACAATGAGTTGCTTAGTGAAATTAAGATGAAAAACAAAGTGGGGGATGCTTATGTGAAATACATAGAGGAGATTGTGCAAGATGGACCTGAAACAGCATTGGTGATTCGTTCATTGGTGACTGAGTATGATTTGATCATTGTTGGAAGACAAGCAGGGGTTGAAAGTCCTCAAACTTCAGGGTTGTTGCAGTGGAGTGAGTATCCAGAACTTGGGGTGTTAGGGGACTTGTTAGCATCAACTGATGCAGCTGGCAAAGCTTCAGTGTTTGTGATACAACAACAAAGAACAGCCATGGATGTTTGA 2376 0.3994 MSVKLSDPVEYFRTCIYLPPRVNSDIPWCNLKGSKMLPINSLPMLEMQMCLIFLGTLFSHTILCRFGIPRFTSMSIVGIIFGTSFNETWATMSERLFYFDSQENLGLFSLFGFMLFMFYIGVKTDMSMVYRTRRRATNVGSIAIMAPFLCGMAVLRFHSSKYLDTIDATKLGIVISLLSGTSFPVVSSVLGDLKILNSELGRLGQSSALVSEMFNIFLTSFLQFIRLMMQFGVLRALICVSATILFVFLVMFIIRPAMFWIIRQTPEGSPVNDHHVYCILIMALLSSYATHRFGFSALMGPFILGLAIPEGPPLGTAIIKKIDTFCYGVLIPIFVTTCAMRVDLTDFMVWKKEEDGRVDEFMVQTLIIVVVTFVAKFVACMVPPLCSEMPLNDAASLSFVMSCKGIVDMAGLSFFRDVIGLPDNVYALLMIYIIVNATFMQLLLGFFYDPMKKYTGYTRRNIIDLRKNMELRVLTCIHRSDNIPPTINLLEATYPTRMEPLSVYVLQLIELIGRASPVFICHQLQRKKKADCNSSMAEKLLDAFKNFEREFNDALIVNTFTAISPAEMMYDDICTLALDRFTCLIVLPFHRKWSSDGNSIELEDESLRDLNYRVMERAPCSVGVLIERAQMTHIFSPETPYTVCLLFIGGKDDREALFFAKRMTKNPHVRLTVVRFIASVGNSNDWQTLLDNELLSEIKMKNKVGDAYVKYIEEIVQDGPETALVIRSLVTEYDLIIVGRQAGVESPQTSGLLQWSEYPELGVLGDLLASTDAAGKASVFVIQQQRTAMDV. 792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g04596 791 Gene3D - 45 455 IPR038770 -
Seca9g04596 791 PANTHER CATION/H + ANTIPORTER 41 786 - -
Seca9g04596 791 Pfam Sodium/hydrogen exchanger family 50 436 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g04596 Seca-Chr9 127179399 127183091 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g04596 41 786 Antiporter Super Family AT5G22900 36.189 2.35e-167 503
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g04596 K26731 - gmx:100785558 1123.61