Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g04584 ATGGGATACATTCCTTGTTTTTTCTGGTTGCTCCTCCAATCTTATTGGTTGCTTTTTGTTATAATTTTGGGTTTTACAATTATCAAAGCCTTAACCAATCACTTTATTGAGAAGCCCAATAAACCAAAATTGCCCCCAGGTCCCAAACCATGGCCTATAGTTGGTAATCTTCCTGAAATGCTTGCAAACAAGCCTGCACCTCAGTGGATACATAAGCTGATGAAAGAAATGAACACCGAAATTGCATGTATCAGCCTAGAAAATGTCCAAGTAATCCCTGTGACTTGCCCTGCCATAGCTTGTGAATTCTTGAGAAAACATGATGCAAATTTTGCATCAAGACCAAAAACCATGGCCACTAATATCATCAGTGGTGGTTATTTAACGATAGCTATTACACCCTTTGGGGAACAATGGGAGAAAATGAAGAAAATCTTTGTCAATAAATTGTTCTCCCCACTCAATCATAAATGGCTTCAAGACAAAAGGAATGAAGAGGCTGACAACCTCATCTTTTATGTCTACAATAAATGCAAAAATGTGAATGATGATGATCTTGGCCTTGTAAATGTCAGAACTGCTACAAGACATTATTGTAGTAACGTGATGAGGAAACTTATTTTTAACACAAGGTACTTTGGGAAAGGTAGGGAGGATGGAGGGCCTGGTTTTGAGGAGACAGAATATGTAGATGCCCTTTTCACATTGCTTAGACACGTTTATGCCTTTTATGTTCCTGACTATATGCCAATCATGAGGGGTATTGACTTGGATGGTCATGAGAGAAAGATAAAGAATGCCATGAAGATAGTGAAGAAGTATAATGATCCCATCATTGAACAGAGAATTGAAAAATGGAAGGAGGGATCAATGACGGCTAATGAAGCAGAGGACATTCTTGATATACTAATCTCCCTGAAAGATGCCAACAATAAACCAATATTGACAATAGAGGAGATCAAGGCGCAAAGTTTGGAACTTGTGCTTGGAGGAGTGGACAATCCATCAAATGCAGCGGAATGGGCACTTGCAGAAATGATAAATCAACCAGATTTGCTTCAGCGAGCCACTGAAGAATTGGACAATGTTGTAGGTAAACAGAGGCTAGTTCAGGAATCAGATATTCCAAAGCTCAATTATGTGAAGGCTTGTGCAAGAGAAGCTTTTCGCCTTCATCCATTTAGTCCTTTTAATCCTCCCCGTGTCTGTATGAATGAAACAAAAGTTGGCAATTACCTGATCCCAAAGGGTAGCCATGTCTTGCTAAGCAAACAAGGCCTTGGAAGAAACTCAAAAGTATGGAATGAGCCCCTTAAGTTTAGGCCAGAGCGCCACCTAAAAAGTGATGGATCCATGATAGTTTTAGCAGAACCAGATTTAAGGTTCATATCATTTAGTACAGGAAAGCGAGGTTGTCCTGGAGTTGTGCTTGGCACCACAATGACTGTGATGTTATTGGGTAGGTTGCTTCATGGCTTCACTTGGAGTGCACCTCCTAACATGTCAAGCATCAAACTTGACAAGTCCAACGGTGAAATTTTCCTTACTGGACCACTTGTGGCAGTTGCAAAGCCAAGATTAGCACCAAAATTGTACCACCTACAAATTATGTAA 1614 0.4015 MGYIPCFFWLLLQSYWLLFVIILGFTIIKALTNHFIEKPNKPKLPPGPKPWPIVGNLPEMLANKPAPQWIHKLMKEMNTEIACISLENVQVIPVTCPAIACEFLRKHDANFASRPKTMATNIISGGYLTIAITPFGEQWEKMKKIFVNKLFSPLNHKWLQDKRNEEADNLIFYVYNKCKNVNDDDLGLVNVRTATRHYCSNVMRKLIFNTRYFGKGREDGGPGFEETEYVDALFTLLRHVYAFYVPDYMPIMRGIDLDGHERKIKNAMKIVKKYNDPIIEQRIEKWKEGSMTANEAEDILDILISLKDANNKPILTIEEIKAQSLELVLGGVDNPSNAAEWALAEMINQPDLLQRATEELDNVVGKQRLVQESDIPKLNYVKACAREAFRLHPFSPFNPPRVCMNETKVGNYLIPKGSHVLLSKQGLGRNSKVWNEPLKFRPERHLKSDGSMIVLAEPDLRFISFSTGKRGCPGVVLGTTMTVMLLGRLLHGFTWSAPPNMSSIKLDKSNGEIFLTGPLVAVAKPRLAPKLYHLQIM. 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g04584 537 Gene3D Cytochrome P450 37 530 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g04584 537 FunFam Cytochrome P450 9 37 530 - -
Seca9g04584 537 PRINTS E-class P450 group I signature 198 216 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g04584 537 PRINTS E-class P450 group I signature 339 365 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g04584 537 PRINTS E-class P450 group I signature 423 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g04584 537 PRINTS E-class P450 group I signature 472 495 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g04584 537 PRINTS E-class P450 group I signature 319 336 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g04584 537 PRINTS E-class P450 group I signature 382 400 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g04584 537 PRINTS E-class P450 group I signature 462 472 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g04584 537 PRINTS E-class P450 group I signature 99 120 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g04584 537 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 465 474 IPR017972 GO:0005506|GO:0016705
Seca9g04584 537 SUPERFAMILY Cytochrome P450 45 526 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g04584 537 CDD CYP79 79 527 - -
Seca9g04584 537 PANTHER CYTOCHROME P450 703A2-RELATED-RELATED 18 533 - -
Seca9g04584 537 Pfam Cytochrome P450 45 513 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g04584 Seca-Chr9 126457715 126460285 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g04584 44 532 Cytochrome P450 AT5G05260 54.175 0.0 560
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g04584 - K12153 gmx:100787378 757.288