Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g04556 ATGAAATTTGATTTTCTTGACTTTTTCTTTACATGTAACGTGTCATTGTGCACTTCACGATTGTCACCTGGCTTTTTTATTATTCCTGTAGTGTATTTAGGTGGATATGAAAAGGAAGAAAAGGCTGCAAGAGCTTATGATTTAGCTTCTCTAAAGTATTGGGGACTATCAGCCACTACTAACTTTCCTGTTTCCAATTATACAAAGGAGTTGGAGGACATGCAAAATGTTGGAAAGCAAGAATATATTGCATCATTGCGAAGGAATAACAGTGGCTTTACAAGGGGAACTTCCATATATAGAGGTGTTACATGGTTTGAAATTTAG 327 0.3578 MKFDFLDFFFTCNVSLCTSRLSPGFFIIPVVYLGGYEKEEKAARAYDLASLKYWGLSATTNFPVSNYTKELEDMQNVGKQEYIASLRRNNSGFTRGTSIYRGVTWFEI. 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g04556 108 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 31 104 - -
Seca9g04556 108 ProSiteProfiles AP2/ERF domain profile. 31 63 IPR001471 GO:0003700|GO:0006355
Seca9g04556 108 SUPERFAMILY DNA-binding domain 31 65 IPR016177 GO:0003677
Seca9g04556 108 Gene3D AP2/ERF domain 28 65 IPR036955 GO:0003700|GO:0006355
Seca9g04556 108 CDD AP2 30 65 IPR001471 GO:0003700|GO:0006355
Seca9g04556 108 SMART rav1_2 18 69 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g04556 Seca-Chr9 124006241 124007171 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g04556 31 104 AP2-EREBP Transcription Factor Family AT5G65510 75.676 1.62e-35 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g04556 K09285 - pvy:116146367 132.88