Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g04545 ATGGGCCCATATCAAATCTTGAATCATGTAACATATATTCATAATATAATATCTCAGGTTTCCAATTATACAAAGGAGTTGGAGGACATGCAAAATGTAGGAAAGCAAGAATATATTGCATCATTGCGAAGGAATAGCAGTGACTTTACAAGGGGAACTTCCATATATAGAGATAGTGAAGATGAAGCAGCAGAGGCATATGACATTGCAGCAATGAAGTTTCGAAGTGCAAACGCTATAACTAATTTTGAGATGAGTAGATATGATGTGGAAGCTATATCGAATAGTGTTCTTCCAGTTGGTGGGGCTGCATAA 315 0.3683 MGPYQILNHVTYIHNIISQVSNYTKELEDMQNVGKQEYIASLRRNSSDFTRGTSIYRDSEDEAAEAYDIAAMKFRSANAITNFEMSRYDVEAISNSVLPVGGAA. 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g04545 104 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 18 57 - -
Seca9g04545 104 Gene3D AP2/ERF domain 23 86 IPR036955 GO:0003700|GO:0006355
Seca9g04545 104 SMART rav1_2 30 90 IPR001471 GO:0003700|GO:0006355
Seca9g04545 104 Coils Coil 13 33 - -
Seca9g04545 104 SUPERFAMILY DNA-binding domain 56 86 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g04545 Seca-Chr9 121676135 121677060 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g04545 58 91 AP2-EREBP Transcription Factor Family AT5G57390 50.000 7.73e-06 41.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g04545 K09285 - nnu:104595508 113.235