Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g04537 ATGGCGATTGAAGCAACAGAAAAAGAGGAATTAGTGGTTCATTCATCTTGTGAATTTCCTAACAACGATGGCAATGGATCAAAAATTAACAACGACGCACCTGCTAATTTGGAGTCTACTGTAAAATGGAAGGATAACACAGAGCATGAAGTGACTCGAGATGATATAGTCCCATATGTTGGCATGGAGTTTGATACAGAAGAGCATGCATATAGATTTTACAATATGTATGCTGGCTTCATTGGTATTAGTATTAGAAAAGATTGGAGAAACAAAAGCAAATTAGATGAGGAGATTGTGATATCTCGAAAATTTGTTTGTTTTAAAGAGGGCTTCAAAAAGGTTAAAGGCCATGAAGGAAAAATGACACGTAAAGATATTAGAACTGGATGTTTAGCACACATGCTCATTGGTCGACAATTGAGTGGAAAATATGTTGTTACATCATTTGTAAAAGACCATAATCATGAGCTTGAAACCCCCAAGAGTAGGCATAAATTACCATCACAAAGAAGGGTTTCTATCGCTCAAGCAGCTGAAGTTGAAATGGCAAATCGTTCTGGTATACGGCAAAAATTAATTTTTGAGTTTATGAGTCGCCAGGTTGGGGGGAGAGAGAATGTTGGCTGCACTGCTAAAGATATTAGCAATCATTTGAATTCTAAGAGGATGAAAGAGATGGAAGAAGGTGAGGCTTATACTCTACTTCATTATTTTAAATCAAAGCAAACAGAGAATCAATCCTTCTTCTATGAAATTCAACTTGATGTTGATAATCAAATCACAAACATATTCTGGGCAGATGCTAAAATGGTTGTGGATTATGCTTATTTTGGAGATGTCATATGTTTTGATACTACTTATCGCACTAATAATAATTTACGGCCATTTGCTCCCTTTCTTGGATTCAATCATCATCGAGAAAGTGTGTTATTTGGTGCAGCATTATTATATGATGAAACTGCTGAATCATTTGGGTGGTTGTTTAGGACTTTTCTCAAGGCCATGTGTGGAAGAAAACCAAAGACAATTTTCACAGATCAAGATGCTGCCATGGCAAAAGCAATTTCAGAGGTTTTTCCTGACTCATATCACCGTTTATGTTTGTGGCATTTATTCCAAAATGCACTTAAGAATGTTAATCATGCTTTCAAGAAATCAGATTCTTTTGCTAGAGAGCTTCGAAGTTGCATCTATGACTTTGAGTATGAGCTTGACTTTCTTACTGCTTGGGAGTCATTACTCGATAAGCACGACCTTCACCAAAACAAATGGATGAATGATTTATTTAAGAAGAAAGAAAAATGGGCTTCAGTGTATGGGCGACATACTTTTTCAGCTGGTGCTACTACAACTCAATTAAGTGAGAGTTTCAATGGTCGTTTAAGGCTCTACATGAAGTCTACCTTTAACGTGCTGGAATTTTTCAGGAATTTTGAAAGATGGTGCTTATGTGGATGTTTAGTACCAAAAGCCATAAAATGGAAGGATAACACAGAGCATGAAGTGACTCGAGATGATATAGTCCCATATGTTGGCATGGAGTTTGATACAGAAGATCATGCATATAGATTTTACAATATGTATGCTGGCTTCATTGGTTTTAGTATTAGAAAAGATTGGAGAAACAAAAGCAAATTAGATGAGGAGATTGTGATATCTCGAAAATTTGTTTGTTTTAAAGAGGGCTTCAAAAAGGTTAAAGGCCATGAAGGAAAAATGACCCGTAAAGATATTAGAACTGGATGTTTAGCACACATGGTCATTGGTCGACAATTGAGTGGAAAATATGTTGTTACATCATTTGTAAAAGACCATAATCATGAGCTTGCAACCCCCAAGAGTAGGCATAAATTACCATCACAAAGAAGGGTTTCTATCGCTCAAGCAGCTGAAGTTGAAATGGCAAATCGTTCTGGTATACGGCAAAAATTAATTTTTGAGTTTATGAGTCGCCAGGTTGGGGGGAGAGAGAATGTTGGCTGCACTGCTAAAGATATTAGCAATCATTTGAATTCTAAGAGGATGAAAGAGATGGAAGAAGGTGAGGCTTATACTCTACTTCATTATTTTAAATCAAAGCAAACAGAGAATCAATCCTTCTTCTATGAAATTCAACTTGATGTTGATAATCAAATCACAAACATATTCTGGGCAGATGCTAAAATGGTTGTGGATTATTCTTATTTTGGAGATGTCATATGTTTTGATACTACTTATCGCACTAATAAGAATTTACGGCCATTTGCTCCCTTTCTTGGATTCAATCATCATCGAGAAAGTGTGTTATTTGGTGCAGCATTATTATATGATGAAACTGCTGAATCATTTGGGTGGTTGTTTAAGACTTTTCTCAAGGCCATGTGTGGAAAAAAACCAAAGACAATTTTCACAGATCAAGATGCTGCCATGGCAAAAGCAATTTCAGAGGTTTTTCCTGACTCATATCACCGTTTATGTTTGTGGCATTTATTCCAAAATGCACTTAAGAATGTTAATCATGCTTTCAAGAAATCAGATTCTTTTGCTAGAGAGCTTCGAAGTTGCATCTATGACTTTGAGTATGAGCTTGACTTTCTTACTGCTTGGGAGTCATTACTCGATAAGCACGACCTTCACCAAAACAAATGGATGAATGGTTTATTTAAGAAGAAAGAAAAATGGGCTTCAGTGTATGGGCGACATACTTTTTCAGCTGGTGCTACTACAACTCAATTAAGTGAGAGTTTCAATGGTCGTTTAAGGCTTTACATGAAGTCTACCTTTAACGTGCTGGAATTTTTCAGGAATTTTGAAAGGTTGCTGGAGGACATGCGATATAAGGAGATAGAAGCTAACTATGACATGAGCCAAAAAATGCCATCATTGAGTATGAATATCATGTTGCTAACAAATGCAAGAGATGTTTATACACCAGCTATTTTTTCTATAGTTCGTGGAGAATATGAAAAATTTTGTAATCTTCTATTGAAAGGCTTCAATCAAAACTCTCAACTATATGAATATGATGTGTGTTTGTTTGGTGGTATAAGGCAGCATAAAGTTACCTTCAACTCTAATGAACAGAGTATTGAGTGTAGTTGTCAACTTTTCCAATTTATTGGTATCTTGTGTTGTCATGCTCTTCGAATCCTTAATCATTTGAATATAATTGTTATTCCACCAAAATATATCCTAAAGAGGTGGACTAAGAATGCTCGAAGTGGATGTGTTCTAGACAACAAGGGTCAAATTATCAAAGAAGATCCAAAATTGGCTGTCTCAAATCGCTTTAAGGATTTGTGTCGTACCGCAGTAGAAATATCAAGTAAGGCTGCTGAATGTGAAGATGCTTCAACATTTTTTGCAAGAAAATTGGTGGAAATTGGCATTCAAGTTGATAACATCTTAATTAAAAGATCTTACACACCAATTACAGATCTTGATGATGCAAATTGCCAGACTAATGAAGATACAATAGATAACACAACCACCAATTCAAATGAAAAATATAATGATGTGCCATTTTTTCCTGAATGTCAAGAACCAATAGCAATTGATATTAGTATGACACAAGAATTCAGTTCACAGGATAACCTTGGATGA 3585 0.3576 MAIEATEKEELVVHSSCEFPNNDGNGSKINNDAPANLESTVKWKDNTEHEVTRDDIVPYVGMEFDTEEHAYRFYNMYAGFIGISIRKDWRNKSKLDEEIVISRKFVCFKEGFKKVKGHEGKMTRKDIRTGCLAHMLIGRQLSGKYVVTSFVKDHNHELETPKSRHKLPSQRRVSIAQAAEVEMANRSGIRQKLIFEFMSRQVGGRENVGCTAKDISNHLNSKRMKEMEEGEAYTLLHYFKSKQTENQSFFYEIQLDVDNQITNIFWADAKMVVDYAYFGDVICFDTTYRTNNNLRPFAPFLGFNHHRESVLFGAALLYDETAESFGWLFRTFLKAMCGRKPKTIFTDQDAAMAKAISEVFPDSYHRLCLWHLFQNALKNVNHAFKKSDSFARELRSCIYDFEYELDFLTAWESLLDKHDLHQNKWMNDLFKKKEKWASVYGRHTFSAGATTTQLSESFNGRLRLYMKSTFNVLEFFRNFERWCLCGCLVPKAIKWKDNTEHEVTRDDIVPYVGMEFDTEDHAYRFYNMYAGFIGFSIRKDWRNKSKLDEEIVISRKFVCFKEGFKKVKGHEGKMTRKDIRTGCLAHMVIGRQLSGKYVVTSFVKDHNHELATPKSRHKLPSQRRVSIAQAAEVEMANRSGIRQKLIFEFMSRQVGGRENVGCTAKDISNHLNSKRMKEMEEGEAYTLLHYFKSKQTENQSFFYEIQLDVDNQITNIFWADAKMVVDYSYFGDVICFDTTYRTNKNLRPFAPFLGFNHHRESVLFGAALLYDETAESFGWLFKTFLKAMCGKKPKTIFTDQDAAMAKAISEVFPDSYHRLCLWHLFQNALKNVNHAFKKSDSFARELRSCIYDFEYELDFLTAWESLLDKHDLHQNKWMNGLFKKKEKWASVYGRHTFSAGATTTQLSESFNGRLRLYMKSTFNVLEFFRNFERLLEDMRYKEIEANYDMSQKMPSLSMNIMLLTNARDVYTPAIFSIVRGEYEKFCNLLLKGFNQNSQLYEYDVCLFGGIRQHKVTFNSNEQSIECSCQLFQFIGILCCHALRILNHLNIIVIPPKYILKRWTKNARSGCVLDNKGQIIKEDPKLAVSNRFKDLCRTAVEISSKAAECEDASTFFARKLVEIGIQVDNILIKRSYTPITDLDDANCQTNEDTIDNTTTNSNEKYNDVPFFPECQEPIAIDISMTQEFSSQDNLG. 1195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g04537 1194 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 500 1122 IPR031052 GO:0006355
Seca9g04537 1194 Pfam MULE transposase domain 733 827 IPR018289 -
Seca9g04537 1194 Pfam MULE transposase domain 281 375 IPR018289 -
Seca9g04537 1194 ProSiteProfiles Zinc finger SWIM-type profile. 1013 1049 IPR007527 GO:0008270
Seca9g04537 1194 Pfam FAR1 DNA-binding domain 524 611 IPR004330 -
Seca9g04537 1194 Pfam FAR1 DNA-binding domain 72 159 IPR004330 -
Seca9g04537 1194 SMART 26again6 1024 1051 IPR006564 GO:0008270
Seca9g04537 1194 Pfam SWIM zinc finger 1024 1049 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g04537 Seca-Chr9 121149020 121154906 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca9g04537 MULE 1.4e-28 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g04537 - K17604 lja:Lj0g3v0135969.1 890.567