Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g04534 ATGGAACAGAAGCACGTTCTTTTGTCAGCATTGAGTGTTGGGGTTGGGTTGGGTGTGGGGCTTGGATTGAGTTCAGGACAGGCTGTTCACAAATGGGTTGGAGGAAATCGTGATTCTGGTGAGGTTTCTGGGGAGCAGATTGTGGAGGAGCTCAAGAAACTGATGGTTGACGGAAAGGACAGCAAAGTTACATTTGATGAGTTTCCTTATTACTTAAGTGAAAGAACCCGAGTTTTGTTGACAAGTGCTGCATATGTTCATTTAAAACATCTTAACTATTCCAAGCACACCAGGAACCTCTCACCAGCAAGCAGGGCTATTTTGCTCTCTGGTCCAGCAGAACTTTACCAGCAAATGCTTGCCAGAGCTTTAGCACATTACTTTGAATCGAAGTTGCTATTGTTAGATATTACAGACTTCTCTGTGAAGTTACAGAACAAATATGGATGTTCTAGAAAAGAACCATCTTTCAAAAGGTCAATATCCGAGATGACTTTGGAGCGAATGTCTGGTTTGTTTGGTTCCTTTTCAATTCTGCCTTCAACAAGCGAAACAAGAGGAACTCTGCGTCAACAAAGCAGTACTCTTGAAAGTTCCAGTAATCCTGCAAAGCTTCGGAGGAATGCTTCTGCTGCATCTGATATAAGTAGCACTGCTTCCCAGAGTGGTCCAACAATTGCAGCTCCTTTAAGGCGCACAAGTAGCTTGTGTTTTGATGAAAAGCTCTTTGTGCAGTCACTATACAAGGTTTTGGTTTCTATCTCAGAAACTAGTTCCATCATTTTATACATCAGGGATGTTGAGAAGCTTGTTCTCCAATCACCAAGGTTATATAATCTACTACAAAAAATGATAAAGAAATTGTCAGGCTCGGTGTTGATACTTGGTTCCCAGATATTAGATTCAGAAGATGATTGCAAAGATTTTGATGAAAGGCTCACTATGTTATTCCCCTACAACATTGATATCAAACCTCCTGAAGATGAAATTCATATTGGGAGCTGGAAAGGCCAACTGGAAGAGGACATGAAAATTATTCAGTTTCAAGATAACAGAAACCACATTGCTGAAGTACTTGCGGCAAATGACATTGATTGTGATGACTTGAATTCAATCTGCCATGCAGACACTATGATGCTCAGTAATTATATTGAAGAAATTGTGGTATCTGCAATATCTTACCATTTGATGAATACCAAGGATCCGGAATACCGAAATGGAAAGCTAGTTATATCAGCCAATAGTTTGTCCCATGGATTGAGTCTGTTCCAGGAAGGCAAGAGTAGTGGGAATCTGAAGACTAATGAATCTAACAAGGAAAATGCTGGAGAAGATATAACTGGTGCTAAGAATGACGTGCGGTGTGACAACCAAGCACCTGAAAATAAAAATGAGACAGAGAAATCCATCCCTGTAACAAAGAAAGATGGTGAAAGTCCTGCACCTGCAAAAGCAGAAGTTCCTGACAATGAGTTTGAGAAGCGTATACGACCAGAGGTTATCCCTGCAAATGAGATAGGGGTCACATTTTCAGATATTGGTGCAATGGATGAGATCAAAGAATCACTTCAAGAGCTGGTAATGCTTCCCCTTAGAAGACCAGACCTCTTCAAAGGTGGGCTTCTAAAGCCATGCAGAGGTATATTGCTTTTTGGTCCTCCTGGTACTGGAAAAACAATGCTTGCAAAGGCAATTGCAAATGAAGCTGGAGCAAGTTTCATTAATGTTTCAATGTCCACCATCACTTCAAAATGGTTTGGAGAAGATGAAAAGAATGTCAGAGCTCTATTCACATTAGCAGCTAAGGTTTCCCCAACTATTATCTTTGTTGATGAGGTTGACAGCATGCTTGGGCAGAGGACTAGAGTTGGAGAGCATGAGGCCATGAGGAAGATTAAAAATGAATTCATGACACACTGGGATGGGCTATTAACACAACCTGGTGAGCAAATCCTTGTTCTTGCTGCAACCAACAGGCCATTTGACCTTGATGAAGCAATTATAAGACGTTTTGAGCGCAGGATCATGGTTGGTCTTCCATCTGTTGAGAACAGGGAAATGATCCTGAAAACACTCCTGGCTAAGGAAAAATATGAAAACTTGGACTTCAAAGAGCTGGCAACCATGACAGAAGGATATACTGGAAGTGATCTTAAGAATTTGTGCATCACTGCAGCTTATCGACCTGTTAGGGAGCTAATACAGCAGGAAAGAATGAAAGAAATGGAAAAGAAAAAAAAAGAGGCAGAAGGTCAAAACTCCGAAGATGCTTCATTTGATAAAGATAAAGAACACCAAGAAATTTCCCTGAGGCCTTTAAACATGGAAGACATGAGACAGGCTAAGAGTCAGGTAGGGTGTGAAATGACTATGAAGCACAATTTAACATCATTCACATAA 2400 0.4079 MEQKHVLLSALSVGVGLGVGLGLSSGQAVHKWVGGNRDSGEVSGEQIVEELKKLMVDGKDSKVTFDEFPYYLSERTRVLLTSAAYVHLKHLNYSKHTRNLSPASRAILLSGPAELYQQMLARALAHYFESKLLLLDITDFSVKLQNKYGCSRKEPSFKRSISEMTLERMSGLFGSFSILPSTSETRGTLRQQSSTLESSSNPAKLRRNASAASDISSTASQSGPTIAAPLRRTSSLCFDEKLFVQSLYKVLVSISETSSIILYIRDVEKLVLQSPRLYNLLQKMIKKLSGSVLILGSQILDSEDDCKDFDERLTMLFPYNIDIKPPEDEIHIGSWKGQLEEDMKIIQFQDNRNHIAEVLAANDIDCDDLNSICHADTMMLSNYIEEIVVSAISYHLMNTKDPEYRNGKLVISANSLSHGLSLFQEGKSSGNLKTNESNKENAGEDITGAKNDVRCDNQAPENKNETEKSIPVTKKDGESPAPAKAEVPDNEFEKRIRPEVIPANEIGVTFSDIGAMDEIKESLQELVMLPLRRPDLFKGGLLKPCRGILLFGPPGTGKTMLAKAIANEAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVSPTIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFMTHWDGLLTQPGEQILVLAATNRPFDLDEAIIRRFERRIMVGLPSVENREMILKTLLAKEKYENLDFKELATMTEGYTGSDLKNLCITAAYRPVRELIQQERMKEMEKKKKEAEGQNSEDASFDKDKEHQEISLRPLNMEDMRQAKSQVGCEMTMKHNLTSFT. 800
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g04534 799 MobiDBLite consensus disorder prediction 184 204 - -
Seca9g04534 799 Gene3D - 680 764 - -
Seca9g04534 799 MobiDBLite consensus disorder prediction 438 493 - -
Seca9g04534 799 SMART AAA_5 544 681 IPR003593 GO:0016887
Seca9g04534 799 Pfam AAA+ lid domain 700 744 IPR041569 -
Seca9g04534 799 MobiDBLite consensus disorder prediction 426 493 - -
Seca9g04534 799 ProSitePatterns AAA-protein family signature. 651 670 IPR003960 GO:0005524|GO:0016887
Seca9g04534 799 MobiDBLite consensus disorder prediction 739 773 - -
Seca9g04534 799 Gene3D - 507 679 IPR027417 -
Seca9g04534 799 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 507 738 IPR027417 -
Seca9g04534 799 Coils Coil 730 752 - -
Seca9g04534 799 Pfam ATPase family associated with various cellular activities (AAA) 548 678 IPR003959 GO:0005524|GO:0016887
Seca9g04534 799 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 47 787 - -
Seca9g04534 799 MobiDBLite consensus disorder prediction 739 772 - -
Seca9g04534 799 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 507 682 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g04534 Seca-Chr9 121071441 121078290 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g04534 508 739 Calmodulin-binding Proteins AT3G56690 39.407 2.78e-43 167