Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g04514 ATGGAGTTAAATAGTGATGATTCGGCTGTTAATCTGGATGATGATAGAGACATAAGTTATAGTGATCCTTCTAGTTCTAGCGATGATAAAAATCATAATCAAAATGATAGAGTTGCTGATTTTGAGGATGAAGTTAATGAAGAAGAGGTAGACACTGATGAGGGAAATGAATTTATGGATGCAGAAGTTGGAGGGGAGGCGTTAAGGAGGATAATTGATTTGACAAGTGATGATATATCGGCATTGGAATTCTGTCGTGAAAATGATGCGTTTAATTTTTACTTTTCTTATGCAAGATGTCATGGATTTGCTGTGAGGAGGGATGATGTAATTAAAGATAGTAAAGGTATGCTCATAATGCGACAGTTCTTATGTAGTAGGGTTGGTTTAAGGGACAAAAAGCATTTGATTAGATTAGATTGGAAAAGGGAACATAGGCCTCTTACTCGAACAAATTGTCAAGCTAAGTTTAGGGTTCGGTTTGATTATAAGACTGGGAAATTTAAGATTGTTTCCTTTTTAGACTCTCATAACCATGAATTGACCCCTGCTAAATTTGTACCTTTAATGCCTGCATATTGTGGTTTGAGTGATGGGGACAAAGCCCAAGTTGATGCATTGCATTCTCATGGTGTTAGACCTTGTCAGATAATGGGTTTTCTTGTTGATAAAAAAGGAGGTTATAGAAACGTTGGTTTTTCAAAGAAAGATTTATACAACTACATAGATGAGGTTAAGAGGGGTAAGATAAAAGATGGGGATGCAGTGGCTGGGTTAAGTTATTTGCAAGGAAAGGCAGATAATAATCCAATATTTTTTTCAAGATTTTTATGTTCTGAGGATGGGAAACTCACTCATCTGTTTTGGTGTGATGAAATAAGTCGGGAAGACTATCAATTTTTTGGTGATGTGCTTGCATTTGATGCAACCTACAAGAAGAATAGGTATAAATATCCAGTGGTGATTTTTTCTGGTAAAAATCACCACTCTCAGGCAGTTATATTTGGGTGTGCATTCATTGCTGATGAAACAATCGATACTTATAAGTGGGTTTTAAGAATGTTTTCAGAAGCAATGTTCAACAAGCATCCAACTGCAGTGGTGACTGATGGTGATGGTGCAATGAGGGAAGCTATTAAGGTAGTATTTTCAAATGCATCTCATAGGTTATGCGGGTGGCATTTGAATAGAAATGCATGTGACAATGTTAAGAATCCTAAATTTTTGGATGATTTCAAGAAAGCAATGTACAATAATTTCACACCAGTAAAATTTGAACAGTTTTGGGAGGAAATGGTAAATAAACATGGTCTACAAGGGAATAGATGGGTGTTGAAGACCTATGATATTAAGGAAATGTGGGCGTCTGCTTATTTGCGTGATAAATTCTTTGCCCGCATAAGAACTACATCTTAG 1416 0.3616 MELNSDDSAVNLDDDRDISYSDPSSSSDDKNHNQNDRVADFEDEVNEEEVDTDEGNEFMDAEVGGEALRRIIDLTSDDISALEFCRENDAFNFYFSYARCHGFAVRRDDVIKDSKGMLIMRQFLCSRVGLRDKKHLIRLDWKREHRPLTRTNCQAKFRVRFDYKTGKFKIVSFLDSHNHELTPAKFVPLMPAYCGLSDGDKAQVDALHSHGVRPCQIMGFLVDKKGGYRNVGFSKKDLYNYIDEVKRGKIKDGDAVAGLSYLQGKADNNPIFFSRFLCSEDGKLTHLFWCDEISREDYQFFGDVLAFDATYKKNRYKYPVVIFSGKNHHSQAVIFGCAFIADETIDTYKWVLRMFSEAMFNKHPTAVVTDGDGAMREAIKVVFSNASHRLCGWHLNRNACDNVKNPKFLDDFKKAMYNNFTPVKFEQFWEEMVNKHGLQGNRWVLKTYDIKEMWASAYLRDKFFARIRTTS. 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g04514 471 MobiDBLite consensus disorder prediction 41 56 - -
Seca9g04514 471 Coils Coil 31 51 - -
Seca9g04514 471 Pfam MULE transposase domain 304 398 IPR018289 -
Seca9g04514 471 MobiDBLite consensus disorder prediction 9 40 - -
Seca9g04514 471 Pfam FAR1 DNA-binding domain 92 182 IPR004330 -
Seca9g04514 471 PANTHER OS01G0519700 PROTEIN 79 452 - -
Seca9g04514 471 MobiDBLite consensus disorder prediction 1 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g04514 Seca-Chr9 118986805 118988220 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca9g04514 MULE 3.6e-25 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g04514 - - ccaj:109811679 540.806