LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Seca9g04508	ATGCACGAGCGTGGGTGTTGCTTGACGTACGACTATGTCACCGACGACGCCACCGATCTGCTTGGGGAGAAGGACTTGGACTCGATCTCCGCCTTGCGTGGCTTGTTGATCTCGCGCCCTGCCGATTCGAGCTTCTCCCACAAGAACGCGCTTCACCACTGCATCGAGCACGCCAAGCTGTGGCTTTCCAAGGCTGAACAGCCTATTGAGCCCAATGCTGGTGTCACATATGCTGGTTTGAGGGAGAAGTTGAACAAGATTATGTCTTCCGAGTATTTCACTACAACTCCTGAGATGAAAGCTCCCATTGAAGTTGTTGTCGCAGCTGCTGCTGGAAATTATGGGTCTTTCCAGGTGCCAGTGCATGGCTCTGTGGTTCCGGTGGAAGTGGAAGGTTCGGATTCTCAGCCTCAGGAGAAGGAAAATTCTCGATCACAGCAGCGCGCACCATTGGGGAAATTGGATGCAGAACTAAAGCATGAAGTTTGCCATTGGGCTGCATATTACGAAAATAGGATGCGCCTTGGACAGAAAGCCATTTTTCACATCGAAGCATTTGTGTGGAGGGTTATAACTCTTATAAGGACAAAATAG	594	0.5034	MHERGCCLTYDYVTDDATDLLGEKDLDSISALRGLLISRPADSSFSHKNALHHCIEHAKLWLSKAEQPIEPNAGVTYAGLREKLNKIMSSEYFTTTPEMKAPIEVVVAAAAGNYGSFQVPVHGSVVPVEVEGSDSQPQEKENSRSQQRAPLGKLDAELKHEVCHWAAYYENRMRLGQKAIFHIEAFVWRVITLIRTK.	198

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Seca9g04508	197	PANTHER	GLYCINE-RICH PROTEIN	2	148	-	-
	Seca9g04508	197	SUPERFAMILY	post-AAA+ oligomerization domain-like	152	193	IPR008921	GO:0003677\|GO:0006260
	Seca9g04508	197	Gene3D	-	149	195	-	-
	Seca9g04508	197	MobiDBLite	consensus disorder prediction	130	150	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Seca9g04508	Seca-Chr9	118774479	118777933	Dispersed/Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Seca9g04508	151	196	Core DNA Replication Machinery Family	AT5G27740	71.739	4.70e-17	76.3

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Seca9g04508	-		-	gmx:100816406	238.424

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