Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g04508 ATGCACGAGCGTGGGTGTTGCTTGACGTACGACTATGTCACCGACGACGCCACCGATCTGCTTGGGGAGAAGGACTTGGACTCGATCTCCGCCTTGCGTGGCTTGTTGATCTCGCGCCCTGCCGATTCGAGCTTCTCCCACAAGAACGCGCTTCACCACTGCATCGAGCACGCCAAGCTGTGGCTTTCCAAGGCTGAACAGCCTATTGAGCCCAATGCTGGTGTCACATATGCTGGTTTGAGGGAGAAGTTGAACAAGATTATGTCTTCCGAGTATTTCACTACAACTCCTGAGATGAAAGCTCCCATTGAAGTTGTTGTCGCAGCTGCTGCTGGAAATTATGGGTCTTTCCAGGTGCCAGTGCATGGCTCTGTGGTTCCGGTGGAAGTGGAAGGTTCGGATTCTCAGCCTCAGGAGAAGGAAAATTCTCGATCACAGCAGCGCGCACCATTGGGGAAATTGGATGCAGAACTAAAGCATGAAGTTTGCCATTGGGCTGCATATTACGAAAATAGGATGCGCCTTGGACAGAAAGCCATTTTTCACATCGAAGCATTTGTGTGGAGGGTTATAACTCTTATAAGGACAAAATAG 594 0.5034 MHERGCCLTYDYVTDDATDLLGEKDLDSISALRGLLISRPADSSFSHKNALHHCIEHAKLWLSKAEQPIEPNAGVTYAGLREKLNKIMSSEYFTTTPEMKAPIEVVVAAAAGNYGSFQVPVHGSVVPVEVEGSDSQPQEKENSRSQQRAPLGKLDAELKHEVCHWAAYYENRMRLGQKAIFHIEAFVWRVITLIRTK. 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g04508 197 PANTHER GLYCINE-RICH PROTEIN 2 148 - -
Seca9g04508 197 SUPERFAMILY post-AAA+ oligomerization domain-like 152 193 IPR008921 GO:0003677|GO:0006260
Seca9g04508 197 Gene3D - 149 195 - -
Seca9g04508 197 MobiDBLite consensus disorder prediction 130 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g04508 Seca-Chr9 118774479 118777933 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g04508 151 196 Core DNA Replication Machinery Family AT5G27740 71.739 4.70e-17 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g04508 - - gmx:100816406 238.424