Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g04469 ATGGCTACATTTGTTTCTGGATTTGTTGTGGGTTTCACTGCTGTTTGGCAATTAGCACTGGTTACCCTCGCTGTAGTCCCTATGATAATAGTAATCGGAGCCATTCACACCACCACATTGGCCAAGCTATCTAGTAAAATCCAAGAAGCTCTTTCTCAAGCTTGA 165 0.4303 MATFVSGFVVGFTAVWQLALVTLAVVPMIIVIGAIHTTTLAKLSSKIQEALSQA. 55
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g04469 54 Pfam ABC transporter transmembrane region 1 53 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Seca9g04469 54 Gene3D ABC transporter type 1, transmembrane domain 1 54 IPR036640 GO:0005524|GO:0016020
Seca9g04469 54 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 1 54 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Seca9g04469 54 SUPERFAMILY ABC transporter transmembrane region 2 53 IPR036640 GO:0005524|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g04469 Seca-Chr9 114879702 114879866 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g04469 1 54 Calmodulin-binding Proteins AT2G36910 85.185 1.84e-25 94.7