Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g04462 ATGGTACTTGCATCTTCCCAATCCCCTGCTAAAATACTAATTGGCCTCTCTTTAGACCCAAATGACAACAAGGAGATTCTCTCATGGGCAATAAGAGTTCTAGCCAATCCTAATGACAGCATTGTGGCTGTGCATGTTCTTGAGAATTACACGTTAATAGCTATTATTGGAATCAAGGATCCAGTGAGACCTGGAGTGAAAGAAGCTGTTAAGACTTGTTTAGAAGCTGGGATTACCATTAGAATGGTAACTGGTAACAACATAAATACTGTTAAAGCGATTGCTAGAGAATGTGGCATCTTGACAAATGGATTGGCGATAGAGGGACCAGATTTCCAGAAAAAGACCCAGCGAGAAATGGAAGAGATAATACCAAAAATACAGGTAATGGCTCGATCCTTGCCTCTTGACAAGAACACCTTAGTGACCCATTTGAGGAATGACTTTAATGAAGTTGTGGCAGTAACTGGTGATGGGACCAATGATGCTCCAGCGTTGCATGAGGCTGATATTAGACTTGCTATAGGTATTGCTGGGACTGAGCTCAAATATGAATTAGTTGATCTGATCACTCAATTTGAATTTGAAAGGAGGTCTGCTATTGGACAGAGTAGCAGTGACATTCTGTGTGACATGGGCAGCCTCATTAGCAGCAAGGTTAGGCTTCAGGTTCAGTGCTTCACTGCTTCTTAA 693 0.4185 MVLASSQSPAKILIGLSLDPNDNKEILSWAIRVLANPNDSIVAVHVLENYTLIAIIGIKDPVRPGVKEAVKTCLEAGITIRMVTGNNINTVKAIARECGILTNGLAIEGPDFQKKTQREMEEIIPKIQVMARSLPLDKNTLVTHLRNDFNEVVAVTGDGTNDAPALHEADIRLAIGIAGTELKYELVDLITQFEFERRSAIGQSSSDILCDMGSLISSKVRLQVQCFTAS. 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g04462 230 Gene3D - 44 61 IPR023299 GO:0000166
Seca9g04462 230 PRINTS P-type cation-transporting ATPase superfamily signature 54 65 - -
Seca9g04462 230 PRINTS P-type cation-transporting ATPase superfamily signature 76 86 - -
Seca9g04462 230 PRINTS P-type cation-transporting ATPase superfamily signature 156 175 - -
Seca9g04462 230 Gene3D - 62 190 IPR023214 -
Seca9g04462 230 PANTHER CATION TRANSPORTING ATPASE 48 190 - -
Seca9g04462 230 SUPERFAMILY HAD-like 49 191 IPR036412 -
Seca9g04462 230 Pfam haloacid dehalogenase-like hydrolase 45 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g04462 Seca-Chr9 114405686 114409010 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g04462 36 190 Primary Pumps ATPases AT4G37640 67.949 2.51e-64 213
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g04462 K01537 - gmx:100801260 231.491