Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g04420 ATGGTTCTTCGCGGGCATTGGAAGGTTCGAAGAGATTTCACTTGCAGCGTCTTGCCGGGTGTTTTTCACACTATTAAAAGTATTTGTGGACGTCGTCAAAACTGGAGGCTGAGAGTGAAGCTGTTAAGGGTATGGCACATGTCTTCACTTGCAAAGCCGAATGACCCGTTTGCCTTTCAAATGGTCTTCATTGATGAAGAGGGTGGGAGGATAGAAGCCACCGTCTCGAAGCACCTTATGATGAAATTTTCTCAAGCTGTGGCCGAGGGTGAGGTTTATAGGCTCTCCAATTTTGGCATGACGGTGAATTCTGGGAAGTTCCGTGCCGTAAACCACGAATTTGAGCTCGTCTTTAATGCTGGCACGAGATTGGTTTCCTGTCCTGCTATTACCATCCCTCTGTCTTGGTTTTGTTTGCTGAAGACTTCAGACATTAACAAAACTAATGGTTCTTCTGATTTCCTCTTAGATTTCATGGGGGTGCTGACGGCTGTTTCGGAGGAAATAACCATGAAGAAGCAAGAGAGGGAGACAAGGCTGATGCTGCTTGATTTAGTAGATTAA 564 0.4557 MVLRGHWKVRRDFTCSVLPGVFHTIKSICGRRQNWRLRVKLLRVWHMSSLAKPNDPFAFQMVFIDEEGGRIEATVSKHLMMKFSQAVAEGEVYRLSNFGMTVNSGKFRAVNHEFELVFNAGTRLVSCPAITIPLSWFCLLKTSDINKTNGSSDFLLDFMGVLTAVSEEITMKKQERETRLMLLDLVD. 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g04420 187 Pfam Domain of unknown function DUF223 61 128 IPR003871 -
Seca9g04420 187 SUPERFAMILY Nucleic acid-binding proteins 22 130 IPR012340 -
Seca9g04420 187 Gene3D - 21 127 IPR012340 -
Seca9g04420 187 CDD RPA1_DBD_A_like 36 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g04420 Seca-Chr9 112896208 112897136 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g04420 55 187 Core DNA Replication Machinery Family AT2G06510 27.206 4.48e-09 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g04420 - K07466 lja:Lj6g3v0884310.1 140.969