Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Seca9g04415 | ATGTATAGTAGACTTGAATTCTTACACTTATTTGAGTTATTTCTATTTATATATACATTAAAATATCTAAATCTGCAGGATGAATCATCTTTAATCTGGATTTCAAATAGTGAAGAAAGAATTCTGAAGCTATCTTCTGTCTCAAGAATTATTCCTGGTCAAAGAACTGCTGTTTTTCAACGTTATCTGCGTCCTGAGAAGGACTATTTGTCCTTTTCACTTATTTATAATAACGGAAAGCGATCCCTTGATTTGATTTGCAAAGATAAAGTTGAGGCAGAAGTGTGGATTTCTGGTCTCAAAGCACTGATATCTTCTGGTCAAGGTGGTCGGTCCAAAATTGATGGATGGAGTGATGGGGGCTTCAATCTTGATGATAGCAGAGACTTAACATCAAATAGTCCAAGTGAAAGTTCAGCTAGCGCGTCACGTGACATTAGTTCTCCTGACATTTCTGTGAGTCTTCCAAATACTTCTCCAAAGTCCTTTCGTCCTGACAGTACCTTAAATTCTGAAAGGTCACATGCACCATCAGAACCAACAAATATGCAAGTAAAAGGATCTGGTTCAGATGCTTTTCGTGTTAGTGTGTCAAGTGCCCCCAGCACATCTAGTCATGGATCTGCACCAGATGACTATGATGCTCTGGGGGATGTATACATATGGGGGGAGATTATCTGTGAAAACTTGAAAGTTGGTGCTGATAAAAGTGTCACTTATTTCAGCCCGAGGGCAGATGTGCTTCTCCCTAGATCACTAGAATCCAATGTAGTTTTAGATGTACACCATATAGCGTGTGGTGTTAGACATGCTTCTTTAGTCACTAGGCAAGGTGAAGTTTTTACATGGGGTGAAGAATCGGGAGGACGCCTTGGCCATGGTGTTGGGAAGAATGTGGTTCAACCTCGTCTAGTTGAAGCATTGACTTCTACAGCTGTTGATTTTGTTGCCTGTGGGGAGTTCCATTCCTGTGCTGTCACAATGGCTGGGGAACTATATACATGGGGTGATGGTACTCATAATGCTGGATTACTTGGTCATGGCACTGATGTTAGTCATTGGATACCAAAGAGAATTGCAGGTCCATTAGAGGGACTTAAAGTTGCATTTGTTGCTTGTGGTCCATGGCACACAGCTTTGATAACTTCAACTGGGCAGCTTTTCACATTTGGTGATGGAACTTTTGGTGTCTTGGGCCATGGAGATAGGGAAAATGTTTCATATCCAAGAGAAGTGGATTCCTTATCTGGATTGAGGACAATAGCTGTTGCATGTGGAGTGTGGCATACTGCAGCTGTTGTAGAGGTTATTGCAACACAATCTAGTGCAAGTGTATCATCAGGTAAATTGTTTACTTGGGGTGATGGAGACAAAAATCGCCTTGGGCATGGGGACAAGGAGGCGCGGCTTAAACCAACTTGTGTGCCTGCACTTATTGATTACAATTTTCATAAAATTGCTTGTGGGCACAGTTTGACAGTAGGCCTGACAACATCTGGGCGTGTTTTTACTATGGGGAGTACTGTTTATGGTCAGCTTGGGAATCCCCAGTCTGATGGAAAGCTGCCCTGCTTGGTTGGAGACAAGATTGCTGGGGAATCCATTGAAGAAATTGCATGTGGTGCATATCATGTGGCCGTTTTAACATCCAAAAATGAAGTTTTTACCTGGGGTAAGGGGGCAAATGGGAGATTGGGTCATGGAGATCTTGAAGATCGAAAAACACCAACATTGGTTGAAGCATTGAAGGATAGACATGTGAAATATATTGCATGTGGTTCAAACTACTCTGCTGCCATATGCCTTCATAAGTGGGTATCTGGTGCTGAGCAGTCTCATTCAAGGAAAGCATTAAGAGCTGCACTGGCACCTAATCCTGGCAAGCCATATCGTGTGTGTGATTCTTGTTATGCAAAATTGAATAAGGTTGCAGAAGCTAACAATAATAATCGGAGGAATGCTTTGCCACGTCTGTCGGGTGAAAACAAGGACAGGTTAGACAAGTCTGAGCTAAGACTGTCCAAGTCAGTAATTCCTTCTAATATGGATTTGATAAAGCAGCTAGATAGTAAGGCAGCCAAACAAGGAAAGAAAGCTGATACGTTCTCACTAGTTCGCACCTCACAAGCACCTTTGCTACAGCTGAAAGATGTTGTCTTCTCCACTGCTGTTGATCTGAGACGAACAGTTCCAAGACCAGTGATTGCACCATCTGGAGTAAGTTCCAGGTCTGTGTCCCCTTTCTCGAGAAGACCAAGCCCCCCTCGTTCGGCCACACCTATTCCAACAACATCAGGACTTTCCTTCTCCAAAAGTATTGCTGATAGTTTGAAGAAAACTAATGAACTTCTAAATCAAGAAGTGCAGAAGTTACGTACTCAGGTCGAGAGCCTGAGACAAAGATGTGAACTACAAGAATTAGAGCTTCAAAGGTCAGCGAAAAAGACTCAAGAAGCTATGGCACTGGCTGCTGACGAATCTGCTAAATCTAAGGCTGCAAAAGAAGTTATAAAGTCACTTACGGCACAGCTCAAAGATCTCGCTGAGAAGCTTCCTCCTGGAGTTTATGATGCCGAAAACAGTAAACCAGCTTACCTACCAAATGGTCTTGAGCCAAATGGCATCCACCATCCAGATTCAAATGGGGAGCTGAACTCCAGGGCTGAATCAATCAGTGGATCTAGTTTGGCTTCCATAGGACTTGAGTCCTCTCTGTTGAATAGAACTGCAGGGAATTTGCCAGGAACCTATGGAACTAATATTCACCATCAAATCCGGGGTCTTGTGACCTCTAATGGGACCAATAGTTATCCTGATGTTAAATTGCCAAATGGTGATGGTGTGATTCGTGCGAGTAGCAGTAGTATGTCAGATACTGTTGATGGTAGGGATTCTGGCCATTCCCATGAAGACGAGAGTGGTTTGAGATCAAGGAATGCTGCACTAGCTGCTAATAGTAGCCAAATCGAGGCGGAATGGATTGAACAGTATGAACCTGGCGTCTATATAACACTTGTGGCCTTGCATGATGGAACAAGAGATTTGAAGCGCGTGCGCTTCAGACTCTTAGCCGGAGGAGATTTGGGGAGCACCAAGCAGAGACTTGGTGGTCAGAGAACCGGGACAAGGTATATGAAAAATACAATGTCCGTGGTGCTGAAGTCTTCCGGCCAAGCAGCACGTAGGGCAGAGGGTGCTGGTTCTCCTGTCACCCAAACTTAG | 3222 | 0.4364 | MYSRLEFLHLFELFLFIYTLKYLNLQDESSLIWISNSEERILKLSSVSRIIPGQRTAVFQRYLRPEKDYLSFSLIYNNGKRSLDLICKDKVEAEVWISGLKALISSGQGGRSKIDGWSDGGFNLDDSRDLTSNSPSESSASASRDISSPDISVSLPNTSPKSFRPDSTLNSERSHAPSEPTNMQVKGSGSDAFRVSVSSAPSTSSHGSAPDDYDALGDVYIWGEIICENLKVGADKSVTYFSPRADVLLPRSLESNVVLDVHHIACGVRHASLVTRQGEVFTWGEESGGRLGHGVGKNVVQPRLVEALTSTAVDFVACGEFHSCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRIAGPLEGLKVAFVACGPWHTALITSTGQLFTFGDGTFGVLGHGDRENVSYPREVDSLSGLRTIAVACGVWHTAAVVEVIATQSSASVSSGKLFTWGDGDKNRLGHGDKEARLKPTCVPALIDYNFHKIACGHSLTVGLTTSGRVFTMGSTVYGQLGNPQSDGKLPCLVGDKIAGESIEEIACGAYHVAVLTSKNEVFTWGKGANGRLGHGDLEDRKTPTLVEALKDRHVKYIACGSNYSAAICLHKWVSGAEQSHSRKALRAALAPNPGKPYRVCDSCYAKLNKVAEANNNNRRNALPRLSGENKDRLDKSELRLSKSVIPSNMDLIKQLDSKAAKQGKKADTFSLVRTSQAPLLQLKDVVFSTAVDLRRTVPRPVIAPSGVSSRSVSPFSRRPSPPRSATPIPTTSGLSFSKSIADSLKKTNELLNQEVQKLRTQVESLRQRCELQELELQRSAKKTQEAMALAADESAKSKAAKEVIKSLTAQLKDLAEKLPPGVYDAENSKPAYLPNGLEPNGIHHPDSNGELNSRAESISGSSLASIGLESSLLNRTAGNLPGTYGTNIHHQIRGLVTSNGTNSYPDVKLPNGDGVIRASSSSMSDTVDGRDSGHSHEDESGLRSRNAALAANSSQIEAEWIEQYEPGVYITLVALHDGTRDLKRVRFRLLAGGDLGSTKQRLGGQRTGTRYMKNTMSVVLKSSGQAARRAEGAGSPVTQT. | 1074 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Seca9g04415 | 1073 | MobiDBLite | consensus disorder prediction | 962 | 976 | - | - | |
| Seca9g04415 | 1073 | ProSiteProfiles | Regulator of chromosome condensation (RCC1) repeat profile. | 385 | 436 | IPR000408 | - | |
| Seca9g04415 | 1073 | Gene3D | - | 18 | 110 | IPR011993 | - | |
| Seca9g04415 | 1073 | Coils | Coil | 774 | 815 | - | - | |
| Seca9g04415 | 1073 | ProSiteProfiles | Regulator of chromosome condensation (RCC1) repeat profile. | 552 | 603 | IPR000408 | - | |
| Seca9g04415 | 1073 | FunFam | PH, RCC1 and FYVE domains-containing protein 1 | 188 | 437 | - | - | |
| Seca9g04415 | 1073 | ProSiteProfiles | Regulator of chromosome condensation (RCC1) repeat profile. | 278 | 329 | IPR000408 | - | |
| Seca9g04415 | 1073 | MobiDBLite | consensus disorder prediction | 125 | 210 | - | - | |
| Seca9g04415 | 1073 | PRINTS | Chromosome condensation regulator RCC1 signature | 489 | 507 | IPR000408 | - | |
| Seca9g04415 | 1073 | PRINTS | Chromosome condensation regulator RCC1 signature | 330 | 346 | IPR000408 | - |
Showing 1 to 10 of 42 entries
Duplication type information
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Seca9g04415 | - | - | gmx:100805364 | 1652.11 |
Showing 1 to 1 of 1 entries