Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g04394 ATGGCAGCGTTGTATGAACCTGTTAGCAGCATCTTTCCTTGTAGGCAAAATTGGAGGTTGAAAGTTAGAGTTGTCCGAGTGTGGGAGATGTTTCCAATTGATGAACCAACTAGGACTTTCTCAATCGAAATGGTTTTGGTTGATCAGATGCACAGTGTCATTGAGGGGGAGGCCTACAAGATGCATTATTTTGGAGTTGTTCGTAATCTGGGTTCATATAGGGCCATGAAGCATGAGTACAAATTGATCTTTCATCCTAGAACAAGGGTGATCAGGTGCGAGTCTGCTAGCATACCGTTGCATGGCTTGACACTGATGAACACTGAGGATTTGATGAAAACTAATGGGCAAAGTGACTATCTCGTGGATACGGTTGGTGTTCTAACTGCCATATCTGCGGAGAAACGTTCATTTCGTGATGGGAGGATGACAAGGGCAATGCAGATGGAGATATCTGATGATAAGGGTAAGGTTCAGTGCGCTATGTTTGGTAATTACGTTGACATGGTTGGCGATCTGTTACGAGACATGGGACCTGAGTTACCTGTGTTGGTAGCTATGTTTGCCAAAGTGAAACTCTATAAAGGTAAGTAA 594 0.436 MAALYEPVSSIFPCRQNWRLKVRVVRVWEMFPIDEPTRTFSIEMVLVDQMHSVIEGEAYKMHYFGVVRNLGSYRAMKHEYKLIFHPRTRVIRCESASIPLHGLTLMNTEDLMKTNGQSDYLVDTVGVLTAISAEKRSFRDGRMTRAMQMEISDDKGKVQCAMFGNYVDMVGDLLRDMGPELPVLVAMFAKVKLYKGK. 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g04394 197 CDD RPA1_DBD_A_like 19 90 - -
Seca9g04394 197 SUPERFAMILY Nucleic acid-binding proteins 7 96 IPR012340 -
Seca9g04394 197 Gene3D - 41 95 IPR012340 -
Seca9g04394 197 Pfam Domain of unknown function DUF223 49 96 IPR003871 -
Seca9g04394 197 SUPERFAMILY Nucleic acid-binding proteins 105 196 IPR012340 -
Seca9g04394 197 Gene3D - 97 197 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g04394 Seca-Chr9 112208698 112215186 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g04394 7 197 Core DNA Replication Machinery Family AT4G19130 19.070 4.57e-07 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g04394 - - lja:Lj0g3v0341019.1 185.267