Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g04384 ATGCCTGGTGGAAGTCTGTATGATTACTTGCACAAACATCATAACGTCTTGGAGCTGTCTCCATTACTGAAGTTTGCGATTGATGTTAGCAAGGGTATGGAGTATTTGCATAGAAACAACGTAATTCACAGGGATTTGAAGACAGCCAATTTGCTGATGGACAGACACGACGGGGTTGTTAAAGTAGCAGATTTTGGAGTTGCCCGATTCCTAAATCAAGGGGGAGTGATGACAGCAGAAACGGGAACATATAGATGGATGGCGCCAGAGTATCTTATTCTTATCGGATTTTCTCACAAGGTTATAAACCATCAGCCGTATGATCAGAAAGCAGATGTGTTCAGCTTTTCCATAGTGCTTTGGGAATTAGTGACATCAAAGGTACCATATGATACTATGACTCCACTACAAGCTGCCTTGGGTGTAAGACAGGGTCTGCGCCCAGAACTTCCAAAGCATGGGCACCCTAAACTAGTAGATTTGATGCAAAGATGTTGGGAAGCAGTTCCAAGCAACCGGCCATCCTTCCATGAGATAACTGTCGAACTTGAGAATCTTATACAAGAAGTTGAGAATGATTCACAACCTAATGGTGCTTGA 600 0.4317 MPGGSLYDYLHKHHNVLELSPLLKFAIDVSKGMEYLHRNNVIHRDLKTANLLMDRHDGVVKVADFGVARFLNQGGVMTAETGTYRWMAPEYLILIGFSHKVINHQPYDQKADVFSFSIVLWELVTSKVPYDTMTPLQAALGVRQGLRPELPKHGHPKLVDLMQRCWEAVPSNRPSFHEITVELENLIQEVENDSQPNGA. 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g04384 199 CDD STKc_MAP3K-like 1 183 - -
Seca9g04384 199 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 1 189 - -
Seca9g04384 199 Pfam Protein tyrosine and serine/threonine kinase 1 182 IPR001245 GO:0004672|GO:0006468
Seca9g04384 199 ProSitePatterns Serine/Threonine protein kinases active-site signature. 41 53 IPR008271 GO:0004672|GO:0006468
Seca9g04384 199 SMART serkin_6 1 187 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca9g04384 199 Gene3D Transferase(Phosphotransferase) domain 1 1 190 - -
Seca9g04384 199 ProSiteProfiles Protein kinase domain profile. 1 187 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca9g04384 199 SUPERFAMILY Protein kinase-like (PK-like) 1 189 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g04384 Seca-Chr9 111617241 111624776 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g04384 1 195 MAP Kinase Kinase Kinase AT4G35780 61.224 2.98e-80 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Seca9g04384 PK_Tyr_Ser-Thr 1.9e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g04384 - - gmx:100797987 337.035