Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g04359 ATGAGTTTTTCTCCTTTCAAAATAGGAATTCCAGGATCTTTGATTGGGGAAATTCCCCTATCCCTATCCCAGGAAAGAGAACACGCACTGAGGTCATTCAAGAGTGGAAACACACCAATTCTAGTGGCAACGAATGTTGCAGCACGTGGTCTCGATATTCCAAGGGTAGCACATGTGGTAAATTTTGATCTCCCCAATGACATTGATGATTATGTGCACAAGATAGGAAGAACAGGGCGAGCTGGTAAAATGGGATTAGAAACAGCCTTCTTCAATGACAGTAATTTGTCCTTGGCTAAACCATTGGCTGATCTGATGCAAGAGGCAAATCAAGAAGCTATCATCAAGCCTCAGTATGTTGACCACATTCCAAAAGCGGTACAAGGAAATGTGGGGCAAGTGCTAGACCAGAAAAATGAGAGAGATATGAAGGCCGAGCTTTGTCATGATCTTGAGCTTAATCAGGTTATAGATCGTAATGTAGGTGACCTTTCAGGTGGTGAGCTTCAAAGGTTTGCTATTGCCGTTGTTGCCATCCAAAATGCTGAGATATACATGTTTGATGAACCTTCTAGCTATCTTGATGTGAAACAGAGGCTAAAAGCTGCCCAAGTTACTCGATCATTGCTTAGGCCTAATAGGTTTATGCCCTTTTGTCTCAGTAGTGTCTGCCTTAACCTTTGCCTATATCACGATGTGTACTTCCCCTGA 711 0.4276 MSFSPFKIGIPGSLIGEIPLSLSQEREHALRSFKSGNTPILVATNVAARGLDIPRVAHVVNFDLPNDIDDYVHKIGRTGRAGKMGLETAFFNDSNLSLAKPLADLMQEANQEAIIKPQYVDHIPKAVQGNVGQVLDQKNERDMKAELCHDLELNQVIDRNVGDLSGGELQRFAIAVVAIQNAEIYMFDEPSSYLDVKQRLKAAQVTRSLLRPNRFMPFCLSSVCLNLCLYHDVYFP. 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g04359 236 CDD SF2_C_DEAD 21 91 - -
Seca9g04359 236 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 24 117 IPR027417 -
Seca9g04359 236 Gene3D - 17 81 IPR027417 -
Seca9g04359 236 Gene3D - 82 219 IPR027417 -
Seca9g04359 236 PANTHER ATP-BINDING TRANSPORT PROTEIN-RELATED 106 214 IPR013283 -
Seca9g04359 236 SMART helicmild6 6 82 IPR001650 -
Seca9g04359 236 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 108 211 IPR027417 -
Seca9g04359 236 Pfam Helicase conserved C-terminal domain 24 82 IPR001650 -
Seca9g04359 236 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 1 121 IPR001650 -
Seca9g04359 236 Pfam ABC transporter 127 191 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g04359 Seca-Chr9 111060197 111061457 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g04359 13 102 Eukaryotic Initiation Factors Gene Family AT3G19760 35.556 4.32e-17 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g04359 K06174 - atr:18448509 199.519