Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca9g04359 | ATGAGTTTTTCTCCTTTCAAAATAGGAATTCCAGGATCTTTGATTGGGGAAATTCCCCTATCCCTATCCCAGGAAAGAGAACACGCACTGAGGTCATTCAAGAGTGGAAACACACCAATTCTAGTGGCAACGAATGTTGCAGCACGTGGTCTCGATATTCCAAGGGTAGCACATGTGGTAAATTTTGATCTCCCCAATGACATTGATGATTATGTGCACAAGATAGGAAGAACAGGGCGAGCTGGTAAAATGGGATTAGAAACAGCCTTCTTCAATGACAGTAATTTGTCCTTGGCTAAACCATTGGCTGATCTGATGCAAGAGGCAAATCAAGAAGCTATCATCAAGCCTCAGTATGTTGACCACATTCCAAAAGCGGTACAAGGAAATGTGGGGCAAGTGCTAGACCAGAAAAATGAGAGAGATATGAAGGCCGAGCTTTGTCATGATCTTGAGCTTAATCAGGTTATAGATCGTAATGTAGGTGACCTTTCAGGTGGTGAGCTTCAAAGGTTTGCTATTGCCGTTGTTGCCATCCAAAATGCTGAGATATACATGTTTGATGAACCTTCTAGCTATCTTGATGTGAAACAGAGGCTAAAAGCTGCCCAAGTTACTCGATCATTGCTTAGGCCTAATAGGTTTATGCCCTTTTGTCTCAGTAGTGTCTGCCTTAACCTTTGCCTATATCACGATGTGTACTTCCCCTGA | 711 | 0.4276 | MSFSPFKIGIPGSLIGEIPLSLSQEREHALRSFKSGNTPILVATNVAARGLDIPRVAHVVNFDLPNDIDDYVHKIGRTGRAGKMGLETAFFNDSNLSLAKPLADLMQEANQEAIIKPQYVDHIPKAVQGNVGQVLDQKNERDMKAELCHDLELNQVIDRNVGDLSGGELQRFAIAVVAIQNAEIYMFDEPSSYLDVKQRLKAAQVTRSLLRPNRFMPFCLSSVCLNLCLYHDVYFP. | 237 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca9g04359 | 236 | CDD | SF2_C_DEAD | 21 | 91 | - | - | |
Seca9g04359 | 236 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 24 | 117 | IPR027417 | - | |
Seca9g04359 | 236 | Gene3D | - | 17 | 81 | IPR027417 | - | |
Seca9g04359 | 236 | Gene3D | - | 82 | 219 | IPR027417 | - | |
Seca9g04359 | 236 | PANTHER | ATP-BINDING TRANSPORT PROTEIN-RELATED | 106 | 214 | IPR013283 | - | |
Seca9g04359 | 236 | SMART | helicmild6 | 6 | 82 | IPR001650 | - | |
Seca9g04359 | 236 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 108 | 211 | IPR027417 | - | |
Seca9g04359 | 236 | Pfam | Helicase conserved C-terminal domain | 24 | 82 | IPR001650 | - | |
Seca9g04359 | 236 | ProSiteProfiles | Superfamilies 1 and 2 helicase C-terminal domain profile. | 1 | 121 | IPR001650 | - | |
Seca9g04359 | 236 | Pfam | ABC transporter | 127 | 191 | IPR003439 | GO:0005524 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca9g04359 | Seca-Chr9 | 111060197 | 111061457 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca9g04359 | 13 | 102 | Eukaryotic Initiation Factors Gene Family | AT3G19760 | 35.556 | 4.32e-17 | 77.8 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca9g04359 | K06174 | - | atr:18448509 | 199.519 |