Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g04344 ATGGCAACCAATCAAACAATATCTGTCAACCAAGCCAAATTTGTCCTTCCAAATCCAAACAATGAACTTGAGCAACAAGCAACAGTTGTGGAGATTGAAACCAATGACTTTGACTACTCAAAAAGATCTCAATGGCTACGTGCTGCTGTGTTGGGAGCCAATGATGGGTTGGTCTCAACAGCATCTCTGATGATGGGAGTGGGAGCAGTGAAGCAAGACATTAAGGCCATGATCTTATCTGGGTTTGCAGGGTTGGTGGCTGGGGCTTGTAGTATGGCCATAGGGGAGTTTGTGTCTGTGTACTCTCAGTTGGACATAGAAGTTGCTCAAATGAAGAGACAGAATGAAAGGGGAAGTGGCAGAGAACATGAAGATACTGAAGAGAAAGAAAGTTTGCCAAACCCTTTACAAGCAGCAGCAGCCTCAGCTTTAGCCTTTAGTGTTGGTGCAATGGTGCCTCTGCTTGCAGCCTCCTTTATAAAGGGATATAAGGTGAGGGTTGGAGTGGTTGTAGCTGCAGTGAGCTTTGCTTTGGTGGTGTTTGGTTGGTTAGGGGCAGTGTTGGGTAAGGCTCCAGTGTTGAGGTCTGCTGTGAGGGTCTTGGTTGGAGGTTGGATGGCCATGACCATTACTTTTGGTCTAACCAAGTTGATTGGCTCAAGTGGACTTTAG 672 0.4643 MATNQTISVNQAKFVLPNPNNELEQQATVVEIETNDFDYSKRSQWLRAAVLGANDGLVSTASLMMGVGAVKQDIKAMILSGFAGLVAGACSMAIGEFVSVYSQLDIEVAQMKRQNERGSGREHEDTEEKESLPNPLQAAAASALAFSVGAMVPLLAASFIKGYKVRVGVVVAAVSFALVVFGWLGAVLGKAPVLRSAVRVLVGGWMAMTITFGLTKLIGSSGL. 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g04344 223 CDD Nodulin-21 44 192 - -
Seca9g04344 223 Pfam VIT family 125 215 IPR008217 GO:0005384|GO:0030026
Seca9g04344 223 Pfam VIT family 46 127 IPR008217 GO:0005384|GO:0030026
Seca9g04344 223 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 24 218 IPR008217 GO:0005384|GO:0030026
Seca9g04344 223 MobiDBLite consensus disorder prediction 112 132 - -
Seca9g04344 223 MobiDBLite consensus disorder prediction 112 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g04344 Seca-Chr9 110127621 110128292 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g04344 18 223 Nodulin-like Gene Family AT3G43660 70.388 1.65e-100 288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g04344 K22736 - pop:7466401 322.013