Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g04342 ATGGTGCCCTTTGTTTTTCCTCTTCTATTCTTCTCATTCTTAGTGGGGAATTCTAAAGGACAACTCCAAGTGGGTTTCTACTCCAACACATGTCCTCAAGCAGAGCCCACTGTTCGTGCTGTTGTTAGAGATGTTGTTCTCTCTGACCCCAACATGGCTGCTGTCTTGCTCAGGCTTCAGTTTCATGACTGCTTTGTTGAGGGATGTGATGGTTCAATTCTGATCAACAATGGTCCACAATCAAAGAAACTATCATTTGCACATCAAGGGGTTAGGGGGTTTGGAGTGATAGAAAGAGTCAAGGCACAATTGGAAGCATCTTGCCCAGGAGTGGTTTCTTGTGCAGACATAGTGGCATTGGCATCCTGA 369 0.4526 MVPFVFPLLFFSFLVGNSKGQLQVGFYSNTCPQAEPTVRAVVRDVVLSDPNMAAVLLRLQFHDCFVEGCDGSILINNGPQSKKLSFAHQGVRGFGVIERVKAQLEASCPGVVSCADIVALAS. 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g04342 122 ProSitePatterns Peroxidases active site signature. 53 64 IPR019794 GO:0004601
Seca9g04342 122 PRINTS Haem peroxidase superfamily signature 112 122 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca9g04342 122 PRINTS Haem peroxidase superfamily signature 53 67 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca9g04342 122 PRINTS Plant peroxidase signature 111 121 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca9g04342 122 PRINTS Plant peroxidase signature 55 75 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca9g04342 122 PRINTS Plant peroxidase signature 92 105 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca9g04342 122 PRINTS Plant peroxidase signature 31 50 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca9g04342 122 Pfam Peroxidase 38 121 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca9g04342 122 SUPERFAMILY Heme-dependent peroxidases 21 122 IPR010255 GO:0004601|GO:0006979|GO:0020037
Seca9g04342 122 Gene3D - 21 122 - -
Seca9g04342 122 PANTHER PEROXIDASE 25-RELATED 11 121 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca9g04342 122 ProSiteProfiles Plant heme peroxidase family profile. 21 122 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g04342 Seca-Chr9 110060920 110061950 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g04342 16 122 Peroxidase AT4G25980 69.159 7.94e-51 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g04342 K00430 - gmx:547549 191.815