Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g04319 ATGTGCTTTTTGATGGATCCTCAAACTGGGAAGAAGGTCTGCTATGTCCAGTTTCCTCATAGAGTTGATGGTATTGATACTCATGATCATTATGGCAACAGGAACACAGTTTTCTTTGATATTAACATAAAGGGTCTAGATGGTATTCAGGGTCCTGTATATGTGGCAACAGGATGTGTTTTTAGGAGGCAAGATTTGTATGGTTATAATCCTCCTAGGAGGCAAGATATGTTTCACACACACACACACACACACTCATATGACAAAAATTACATATGGCAAATGTGTTGTATAACAAGTTTTGAGAGAGGGAATTCACCTAGTAAGCACAGGCGAAGTAAAGTGACTGTTGCATAA 357 0.3866 MCFLMDPQTGKKVCYVQFPHRVDGIDTHDHYGNRNTVFFDINIKGLDGIQGPVYVATGCVFRRQDLYGYNPPRRQDMFHTHTHTHSYDKNYIWQMCCITSFERGNSPSKHRRSKVTVA. 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g04319 118 Pfam Cellulose synthase 1 99 IPR005150 GO:0016020|GO:0016760|GO:0030244
Seca9g04319 118 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 1 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g04319 Seca-Chr9 108890627 108891081 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g04319 1 73 Cell Wall Biosynthesis AT5G17420 83.562 2.02e-42 146
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g04319 K10999 - gmx:100799375 147.132