Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g04316 ATGCAAGAGGTAGATAATAGGAATAATGAGGGTGATGGTGAAAATAACTTAAAATCCAACAATGAAGCCATTGTTTGTTCTGATGAGGTTGTTCCTGATGTGTACAAAAGGATTTCTGAGTTAAGTGATGACGATATTAGATTGCTTGAGTTTGATTCTGAACAGGATGCATATGAGTTCTATAGTGAATATGCGAAATTAAAAGGCTTTGTTGTTAGGAAAAATGATGTTTATCGTGATCGTAATAAGCGTATTACAATGAGGCAATTGGTATGTAATATGCAGAGTGAAGGAGTGAGAAGCATTTAA 309 0.343 MQEVDNRNNEGDGENNLKSNNEAIVCSDEVVPDVYKRISELSDDDIRLLEFDSEQDAYEFYSEYAKLKGFVVRKNDVYRDRNKRITMRQLVCNMQSEGVRSI. 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g04316 102 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 14 94 - -
Seca9g04316 102 MobiDBLite consensus disorder prediction 1 20 - -
Seca9g04316 102 Pfam FAR1 DNA-binding domain 59 95 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g04316 Seca-Chr9 108205786 108206094 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca9g04316 FAR1 9.6e-07 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g04316 - K17604 tpra:123889926 80.4925