Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g04298 ATGGCTGCTTCAACAATGGCTCTCTCTTCTCCATCATTGGCTGGGCAGGCAATCAAGCTTGCTCCATCCACCCAGGACCTTGGCAATGGAAGGGTCACCATGAGGAAAGCAACCACTAAGCAAACTTCTTCTGGAAGCCCATGGTACGGCCCAGACCGTGTCAAGTACTTGGGCCCATTCTCCGGTGAGCCCCCATCCTACCTCACTGGTGAATTCCCAGGTGACTATGGTTGGGACACTGCTGGGCTTTCTGCTGACCCAGAGACATTTGCCAAAAACCGTGAGCTTGAAGTCATCCACTGCAGATGGGCCATGTTGGGAGCCCTGGGCTGCGTCTTCCCTGAGCTCTTGGCCCGCAACGGTGTTAAATTCGGCGAAGCTGTGTGGTTCAAGGCTGGGTCTCAAATATTCAGTGAGGGCGGGCTTGACTACTTGGGCAACCCAAGCTTGATCCACGCACAAAGCATCCTTGCCATCTGGGCCTGCCAAGTTATCTTGATGGGTGCTGTTGAGGGTTACCGTATTGCTGGTGGGCCTCTTGGTGAGGTAACTGACCCATTGTACCCAGGTGGCAGCTTTGACCCACTGGGCCTTGCTGATGACCCAGAGGCTTTTGCAGAGTTGAAGGTGAAAGAGATCAAGAATGGAAGGTTAGCTATGTTCTCTATGTTTGGATTCTTTGTTCAAGCCATTGTGACTGGAAAAGGACCTTTGGAAAACCTTGCTGATCACCTCGCTGACCCAGTCAACAACAATGCTTGGGCCTATGCCACAAACTTTGTCCCCGGAAAGTGA 795 0.5258 MAASTMALSSPSLAGQAIKLAPSTQDLGNGRVTMRKATTKQTSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVILMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK. 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g04298 264 Gene3D Chlorophyll a/b binding protein domain 55 257 - -
Seca9g04298 264 FunFam Chlorophyll a-b binding protein, chloroplastic 55 257 - -
Seca9g04298 264 SUPERFAMILY Chlorophyll a-b binding protein 47 261 - -
Seca9g04298 264 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 264 IPR001344 GO:0009765|GO:0016020
Seca9g04298 264 Pfam Chlorophyll A-B binding protein 64 230 IPR022796 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g04298 Seca-Chr9 107659682 107660476 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g04298 1 264 Chloroplast and Mitochondria Gene Families AT2G34430 87.594 5.02e-173 476
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g04298 K08912 - egr:104444821 522.316