Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g04296 ATGGGTGCTGTCGAGGGTTACCGCATTGCTAGTGGGCCTCTTGGTGAGGTCACAGACCCATTGTACCCAGGTGGCAGCTTTGACCCATTGGGCCTTGCTGATGATCCAGAGGCTTTTGCAGAGTTGAAGGTGAAAGAGATCAAGAATGGAAGTTTAGCTATGTTCTCTATGTTTGGATTCTTTGTTCAAGCCATTGTGACTGGAAAGGGACCTTTGGAAAACCTTGCCGATCACCTCGCTGACCCAGTCAACAACAATGCTTGGGCCTATGCCACAAACTTTGTTCCCGGAAAATGA 297 0.4882 MGAVEGYRIASGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGSLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK. 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g04296 98 Pfam Chlorophyll A-B binding protein 1 64 IPR022796 -
Seca9g04296 98 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 98 IPR001344 GO:0009765|GO:0016020
Seca9g04296 98 SUPERFAMILY Chlorophyll a-b binding protein 1 95 - -
Seca9g04296 98 Gene3D Chlorophyll a/b binding protein domain 1 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g04296 Seca-Chr9 107642812 107643108 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g04296 1 98 Chloroplast and Mitochondria Gene Families AT2G34430 89.899 1.52e-58 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g04296 K08912 - csin:114297307 200.29