Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g04275 ATGATTGCCATAAAGAATATTGTTCAGCCTCCCAAGGATGCAACTGAGTTGGTTAAAAAAGAAAGCAAGCTTTTGAATAACAAAATGCTCCAGATTCAATCTGAAATTAACACGGTTGGTTATATTAGGCACCGGAACCTTGTGCCTCTGCTAGGTCATGTGTCTGGGCCGGACTGCCACTACCTTCTATATGAATTCATAAAGAATGGAAGTTTGCAGGATATGCTGGAAAAAATTAAAAGGCGTGAAGGGGAGTTGGATTGGTTATCAAGGCACAAGATTGCACTTGGTGTAGCTGGTGACCTTGAATACCTTCACATTAATCAAACTCCACATATAATTCATAGAGACCTCAAGCCTGCAAACATTCTTCTTGATGATGATATGGAAGCTACACTATGCCAAAATCTGCATTTTACCGCGGTTCCGCACGGTTTTTTACTGCGGTAA 450 0.4089 MIAIKNIVQPPKDATELVKKESKLLNNKMLQIQSEINTVGYIRHRNLVPLLGHVSGPDCHYLLYEFIKNGSLQDMLEKIKRREGELDWLSRHKIALGVAGDLEYLHINQTPHIIHRDLKPANILLDDDMEATLCQNLHFTAVPHGFLLR. 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g04275 149 Pfam Protein kinase domain 20 131 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca9g04275 149 ProSiteProfiles Protein kinase domain profile. 1 149 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca9g04275 149 Gene3D Transferase(Phosphotransferase) domain 1 4 135 - -
Seca9g04275 149 SUPERFAMILY Protein kinase-like (PK-like) 20 134 IPR011009 -
Seca9g04275 149 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 13 133 - -
Seca9g04275 149 ProSitePatterns Serine/Threonine protein kinases active-site signature. 113 125 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g04275 Seca-Chr9 104509993 104510442 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g04275 1 133 Receptor kinase-like Gene Family AT2G31880 64.662 4.70e-58 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-2 Seca9g04275 Pkinase 3.3e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g04275 - - gmx:100811980 209.92