Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g04269 ATGAAGGGAGTTGGTTCCCCATCAAAAAAGACACTTGGTGCAAAGGTTTTGAATATCACATGCACATACACATTTACTGATAATTCGACATTGAGACATTTTGCTCAAAACAGAGAGGCTGCAAGAAAAAGTCGTCTCAGGAAAAAGCAATTAGAATCAAGTAGATTAAAGATCACCCACCTTGAACAAGATATTCAAAGAGCGCTTGCTCAGGTGAGGGAAAAAGAACAACAGAGGTTGCTGCAAAATTAG 252 0.3889 MKGVGSPSKKTLGAKVLNITCTYTFTDNSTLRHFAQNREAARKSRLRKKQLESSRLKITHLEQDIQRALAQVREKEQQRLLQN. 84
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g04269 83 Coils Coil 51 78 - -
Seca9g04269 83 PANTHER TRANSCRIPTION FACTOR TGA9 25 69 - -
Seca9g04269 83 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 32 47 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g04269 Seca-Chr9 104194899 104197836 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g04269 26 71 Basic region leucine zipper (bZIP) Transcription Factor Gene Family AT5G06839 68.000 7.38e-13 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g04269 K14431 - gmx:100101904 72.7886