Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g04247 ATGATTAAGAAAGCTGATGACTTGGCTTTCTTAAAAAATCAAGATGGATTGACTTCTTCGCAACTCATTGAAAGAGGTGGGTGTGGGGAGGTTTACAAGGCTGAATTACCTAGAAGTAATGGGAAAATTATTGCCATAAATAAGATTGTTCAGCCTCCCAGGGATGCAACTAAGTTGGTTAAAAAACAAAACAAGCTTTTCAATAACAAAATGCTCCAAATTATGTCTGAGATTATTACGGTTGGTCATATTCGACATCGGAACCTTGTGCTTCTTCTAGCTAATGTGTCTGAGACGGATTGCCAATGCCTTGTTTATGAGTTGATGAAGAAGGGAAATTTGCAGGATATGTTGGACAAAAGTAAAAGGGGTGCAGGGGAGTTGGATTGGCTTTTAACGCACGAGATTGCACTTGGTGTAGCTGCTGGCTTTGAATACCTTCTTATTTGTGGCAGTCTAGAAATAATTCATAGAGAGCTCAAGCCTCCAAACATTCTTCTTGGTGATGATATGGAAGTGTTACTATATTGA 531 0.3898 MIKKADDLAFLKNQDGLTSSQLIERGGCGEVYKAELPRSNGKIIAINKIVQPPRDATKLVKKQNKLFNNKMLQIMSEIITVGHIRHRNLVLLLANVSETDCQCLVYELMKKGNLQDMLDKSKRGAGELDWLLTHEIALGVAAGFEYLLICGSLEIIHRELKPPNILLGDDMEVLLY. 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g04247 176 SUPERFAMILY Protein kinase-like (PK-like) 14 175 IPR011009 -
Seca9g04247 176 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 11 173 - -
Seca9g04247 176 ProSiteProfiles Protein kinase domain profile. 17 176 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca9g04247 176 Gene3D Transferase(Phosphotransferase) domain 1 5 176 - -
Seca9g04247 176 Pfam Protein tyrosine and serine/threonine kinase 20 173 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g04247 Seca-Chr9 103531379 103531909 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g04247 1 173 Receptor kinase-like Gene Family AT2G31880 60.116 5.53e-67 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-2 Seca9g04247 PK_Tyr_Ser-Thr 2e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g04247 - - rcu:8278249 223.787