Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g04191 ATGGAAGGGAATTTGTCACAGGGAGGTATCGTTCAAGGTGGGTCTTCTTTTGGTGGTTTTGATTTGCCTGGATCAATGAGGGTTCATCGTCAAGCACAACATTCACATACCATGAACCAACATCAAACTCATCCTTGCCAAGGGTCTTCAGTGCATTCCTCAATTCATGATGGTTTTCCTCTTACAATGGGAACCATGCAGAGCTGTGATCAAACTATGTCAATGACAGAGTTTAGTCAGGGAGATAGAAACAAAAACTCAGCAAGTGAGGAAGATGAGCCAAGCTTTGCTGAGGAAGGTGTTGATGGTCATCATGAAGTGAGTAGAGGGAAAAAGGGGTCACCTTGGCAGCGGGTTAAGTGGACTGATAAGATGGTGAAGCTTTTGATAACAGCTGTGTCCTATATAGGCGAGGATGCAACTTCTGATGGTGGTGGAAGAAGAAAATTTGCAGTCCTGCAGAAAAAGGGAAAGTGGAAATCTGTTTCCAAGGTCATGGCTGAAAGAGGTTATCATGTTTCTCCTCAGCAGTGTGAGGATAAATTCAATGATCTTAATAAAAGGTACAAAAGGCTTAATGATATGCTTGGGAGGGGCACTTCTTGTCAAGTTGTTGAAAATCCTTCTCTGTTGGATGTAATAGATTATCTTTCTGAGAAAGAAAAAGATGACGTTCGAAAAATATTAAGCTCAAAACATCTCTTCTATGAAGAGATGTGTTCTTACCATAATGGTAATAGATTACATTTACCCCATGATCCTGCATTGCAACGTTCGTTGCAATTAGCTCTCCGAAATAGAGATGATCATGATAATGATGATATCAGAAGGTCCTATCATGATGATCATGATGAAGATGATCAAGATGTGGAAACTGATGATCATGATAATGATGACTTTGAAGAGAATTATGCTTCCCATGGAGATAGTAGAGGACTCTTTGGGGGAATGGGGGGATCTATGAAAAGACTTAAACAAGGGCAAGGCCAAGAAGATGCTACTACTTTTGGGACTTCTTTAAATAGTCAGGAGTACAACAAAGGTTCCTATCCTCAAGGACAAATGGTTCAATCTGACATGAATCAAGCTTTACCTGAAAGCATGAGAGCAGCTTGGTTACAGAAGCAATGGGTTGAATCTCGCTCACTTCAGTTAGAAGAACAGAAGCTACAAATTCAGGTTGAGATGCTGGAACTAGAGAAACAAAGATTCAAGTGGCAGAAGTTTAGTAAGAAAAAAGACCGGGAGTTGGAGAAGTTGAAGCTGGAGAATGAAAGAATGAAGCTTGAGAATGAACGTATTGGATTAGAACTAAAGCGAAAAGAAATGGGCACTGGCTTTAACTAG 1347 0.4046 MEGNLSQGGIVQGGSSFGGFDLPGSMRVHRQAQHSHTMNQHQTHPCQGSSVHSSIHDGFPLTMGTMQSCDQTMSMTEFSQGDRNKNSASEEDEPSFAEEGVDGHHEVSRGKKGSPWQRVKWTDKMVKLLITAVSYIGEDATSDGGGRRKFAVLQKKGKWKSVSKVMAERGYHVSPQQCEDKFNDLNKRYKRLNDMLGRGTSCQVVENPSLLDVIDYLSEKEKDDVRKILSSKHLFYEEMCSYHNGNRLHLPHDPALQRSLQLALRNRDDHDNDDIRRSYHDDHDEDDQDVETDDHDNDDFEENYASHGDSRGLFGGMGGSMKRLKQGQGQEDATTFGTSLNSQEYNKGSYPQGQMVQSDMNQALPESMRAAWLQKQWVESRSLQLEEQKLQIQVEMLELEKQRFKWQKFSKKKDRELEKLKLENERMKLENERIGLELKRKEMGTGFN. 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g04191 448 Gene3D - 121 191 - -
Seca9g04191 448 Coils Coil 410 439 - -
Seca9g04191 448 MobiDBLite consensus disorder prediction 267 284 - -
Seca9g04191 448 Pfam Myb/SANT-like DNA-binding domain 118 242 IPR044822 -
Seca9g04191 448 MobiDBLite consensus disorder prediction 267 343 - -
Seca9g04191 448 FunFam Sequence-specific DNA binding transcription factor 121 191 - -
Seca9g04191 448 MobiDBLite consensus disorder prediction 327 343 - -
Seca9g04191 448 MobiDBLite consensus disorder prediction 30 83 - -
Seca9g04191 448 MobiDBLite consensus disorder prediction 1 115 - -
Seca9g04191 448 MobiDBLite consensus disorder prediction 285 299 - -
Seca9g04191 448 Coils Coil 380 402 - -
Seca9g04191 448 MobiDBLite consensus disorder prediction 84 115 - -
Seca9g04191 448 PANTHER F16F4.11 PROTEIN-RELATED 1 445 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g04191 Seca-Chr9 99749975 99751321 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Seca9g04191 Myb_DNA-bind_4 1.9e-24 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g04191 - - gmx:100816474 723.776