Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g04121 ATGGAAGAACTGACTCCTAATGATATCCGAAGCATGGAGTTTGCTAGTGAAGAGCATGGTGATATATTTTATAGGGCATATGCAAAGCGTCATGGTTTTGTTGTTAGGAAAGATGAGATAAGCCGGGATTTTAAGGGCAATGATATTATGCATCAGTTTGTTTGTAACAAAGAGGGTACTAGGAACAAAAAACATTTGATGAGGATGGATAGGAAAAAAAAACATAGGCCATTAACGTGTTTGGAATGTCAAGCTAAGCTACGAATTCGCTTAGATTATAAGACATCTAAATGGAAAGTGGTTTCTTTTTTGGAGACTCGCAATCATGAGCTTACCCCTTCTACTTTTGTGCACTTACTACCTGGTAATAAAGGGTTGAATAATGCTGATAAATCCCAAGTAGGGAGGTTGCACGCATATGGTGTTAGAACCTGTCACATAATGGGGTACATGCTGGACCAAAAAGGGGGATATGGTTCCCTTGGGTTTTGTAGAAAGGATCTTTATAATTATATTGAACGACAGAAGCTTGAAAAGATTAAAGATGGGGATGCACATTCTGCCTTATGTTACATACAAGCAAAGGCAAACAATGATCCCACACTTTGGGCTAGTTTTCTTGCTTTGGAGGACGGTACTCTAAAGCATTTGTTTTGGGCAGATGGAGTTAGTAGGGCTGATTATTACTGCTTTGGGGATGTTTTGGCATTTGACACAACCTATAAGAAAAACAGATATAACAAGCCATTGGTCATTTTTTCTGGTTGTAATCATCATGGTCAGACTGTTGTTTTTGGTTGTGCTTTGGTTGCCAATGAGACGATTGAGACTTACAAGTGA 840 0.3881 MEELTPNDIRSMEFASEEHGDIFYRAYAKRHGFVVRKDEISRDFKGNDIMHQFVCNKEGTRNKKHLMRMDRKKKHRPLTCLECQAKLRIRLDYKTSKWKVVSFLETRNHELTPSTFVHLLPGNKGLNNADKSQVGRLHAYGVRTCHIMGYMLDQKGGYGSLGFCRKDLYNYIERQKLEKIKDGDAHSALCYIQAKANNDPTLWASFLALEDGTLKHLFWADGVSRADYYCFGDVLAFDTTYKKNRYNKPLVIFSGCNHHGQTVVFGCALVANETIETYK. 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g04121 279 Pfam MULE transposase domain 234 278 IPR018289 -
Seca9g04121 279 PANTHER OS01G0519700 PROTEIN 10 278 - -
Seca9g04121 279 Pfam FAR1 DNA-binding domain 23 112 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g04121 Seca-Chr9 94836016 94836855 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca9g04121 FAR1 9.1e-19 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g04121 - - ccaj:109792835 366.696