Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g04101 ATGACCCGTAAAGATATCAGAACTGGATGTTTAGCACACATGGTCATTGGTCGAGAATCAAGTGGAAAATATGTTGTTACATCTTTTATAAAAGATCACAATCATGAGCTTGCAACCCCAAAGAGTAAGCATAAATTACCATCACAAAGAAGGGTTTTTGTTGCTCAAGCTGCTGAAATTGAAATGGCAAATCGCTCTGGTATACGCCAAAAGCTCATATTTGAGTTTATAAGCCGACAGGTTGGAGGGAGAGAGAATGTTGGTTGCACTGCCAAGGATATTAGCAATCATTTGAATTCTAAGAGGATGAAGGAAATGGAAGAAGGTGAAGCGTACACTCTACTTCATTATTTTAAATCAAAGCAAACAGAGAATCCATCTTTCTTTTATGAAATTCAACTTGATGTTGATAATCAAATAAGAAATATTTTCTGGGCAGATGCTAAAATGGTTGTGGATTATGCCTATTTTGGAGACGTGGTATGTTTTGATACAACTTATCGTACCAATAAGAATTTACGACCATTTGCCCCCTTCATTGGATTCAATCATCATCGAGAAAGTGTGTTATTTGGTGCAGCCTTACTATATGATGAAACTACTGAATCATTTGTGTGGCTATTTAAGACTTTTCTTAAGGCTATGTGTGGAAAAATTCCGAAGACGATTTTTACAGATCAAGATGCTGCAATGGCAAAAGCAATTGTAGAGGTTTTTCCTGAATCATATCATCGTTTATGCCTGTGGAATTTATTCCAAAATGCACTTAAGAATATTAATCATGCCTTTAAGAAATCAGATTCTTTTGCTAAAGAGTTGCGGAGTTGCATTTATGACTTTGAGTATGAGGATGATTTTCTTAATGCTTGGAAGTCATTACTTGACAAGCACAACCTTCATCAAAATAAATGGATGCAAGATTTTTTTAAGAAGAAAGAAAAATGGGCTTCGGTGTATGGGCGACATACTTTTTCAGCTGGTGCTACAACAACACAATTAAGTGAGAGTTTCAATGGTCGTTTGAGGCTTCAGCCACCTTATGTAACACCCTAA 1053 0.3618 MTRKDIRTGCLAHMVIGRESSGKYVVTSFIKDHNHELATPKSKHKLPSQRRVFVAQAAEIEMANRSGIRQKLIFEFISRQVGGRENVGCTAKDISNHLNSKRMKEMEEGEAYTLLHYFKSKQTENPSFFYEIQLDVDNQIRNIFWADAKMVVDYAYFGDVVCFDTTYRTNKNLRPFAPFIGFNHHRESVLFGAALLYDETTESFVWLFKTFLKAMCGKIPKTIFTDQDAAMAKAIVEVFPESYHRLCLWNLFQNALKNINHAFKKSDSFAKELRSCIYDFEYEDDFLNAWKSLLDKHNLHQNKWMQDFFKKKEKWASVYGRHTFSAGATTTQLSESFNGRLRLQPPYVTP. 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g04101 350 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 5 338 IPR031052 GO:0006355
Seca9g04101 350 Pfam FAR1 DNA-binding domain 2 38 IPR004330 -
Seca9g04101 350 Pfam MULE transposase domain 160 254 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g04101 Seca-Chr9 92715789 92716841 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca9g04101 MULE 5e-28 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g04101 - K17604 lja:Lj0g3v0135969.1 516.153