Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g04100 ATGGAAGAACTGACTCCTAATGATATCCGAAGCATGGAGTTTGCTAGTGAAGAGCATGGTGATATATTTTATAGGGCATATGCAAAGCGTCATGGTTTTGTTGTTAGGAAAGATGAGATAAGTCGGGACTTTAAGGGCAATGTTATTATGCATCAATTTGTTTGTAACAAAGAGGGTACTAGGAACAAAAAACATTTGGCTAAGCTACGAATTCGCTTAGATTATAAGGCATCTAAATGGAAAGTGGTTTCTTTTGTGGAGACTCGCAATCATGAGCTTACCTCTTCTACTTTTGTGCGCTTACTACCTGGTAATAGAGGGTTGAATAATGCTGATAAATCCCAAGTAGGGAGGTTGCACGCATATGGTGTTAGAACCTGTCACATAATGGGGTACATGCTGGACCAAAAAGGGGGATATGGTTCCCTTGGGTTTTGTAGAAAGGATCTTTATAATTATATTGAACGACAGAAGCTTGAAAAGATTAAAGATGGGGATTCACATTCTGCCTTATGTTACATACAAGCAAAGGCAAACAATGATCCCACACTTTGGGCTAGTTTTCTTGCTTCGGAGGACGGTACTCTAAAGCATTTGTTTTGGGCAGATGGAGTTAGTAGGGCTGATTATTACTGCTTTGGGGATGTTTTGGCATTTGACACAACCTATAAGAAAAACAGATATAACAAGCCATTGGTCATTTTTTCTGGTTGTAATCATCATGGTCAGACTGTTGTTTTTTGTTGTGCTTTGGTTGCCAATGAGACGATTGAGACTTACAAGTGA 786 0.3919 MEELTPNDIRSMEFASEEHGDIFYRAYAKRHGFVVRKDEISRDFKGNVIMHQFVCNKEGTRNKKHLAKLRIRLDYKASKWKVVSFVETRNHELTSSTFVRLLPGNRGLNNADKSQVGRLHAYGVRTCHIMGYMLDQKGGYGSLGFCRKDLYNYIERQKLEKIKDGDSHSALCYIQAKANNDPTLWASFLASEDGTLKHLFWADGVSRADYYCFGDVLAFDTTYKKNRYNKPLVIFSGCNHHGQTVVFCCALVANETIETYK. 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g04100 261 PANTHER OS01G0519700 PROTEIN 10 260 - -
Seca9g04100 261 Pfam FAR1 DNA-binding domain 23 94 IPR004330 -
Seca9g04100 261 Pfam MULE transposase domain 216 260 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g04100 Seca-Chr9 92573143 92573983 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca9g04100 FAR1 4.8e-10 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g04100 - - ccaj:109792835 328.946