Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g04097 ATGAGTGATGAGTATGTAAGATCTGCTCTTGATTATGTAGCAAATCAGAAGGATATGAATTTGTTGAGGGACACTTTTTATAACTCTGCAGGGAAAGAGGGGAAATTCAGGGGAGACCCAAATTTATATGTGGTTGGTTGGGCTAATTTTGCATTTTATGCCACTGATTTTGGGTGGGGAAAACCTGTTTGGTTGGTTCCTGGGGGCATTAATTCTGATGGTAAGGCTTTCATTCTTAATACAGGAAGTGGTGATGGGTTTATTGTGGCCATTTGTTTGCAACCTTCACATGTTGATGCTTTGAAGAAGTTATTTTATGAGGATATGGAGACTACTACTTCCAAGTTGTGA 351 0.3932 MSDEYVRSALDYVANQKDMNLLRDTFYNSAGKEGKFRGDPNLYVVGWANFAFYATDFGWGKPVWLVPGGINSDGKAFILNTGSGDGFIVAICLQPSHVDALKKLFYEDMETTTSKL. 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g04097 116 Gene3D - 1 108 IPR023213 -
Seca9g04097 116 Pfam Transferase family 2 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g04097 Seca-Chr9 92519961 92520311 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g04097 1 107 Monolignol Biosynthesis Gene Families AT5G48930 37.037 6.99e-19 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g04097 K13065 - gmx:100819383 181.415