Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g04057 ATGGAGTTTGCTAGTGAAGAGCATGGTGATATATTTTATAGGGCATATGCAAAGTGTCATGGTTTTGTTGTTAGGAAAGATGAGATAAGCCGAGATTTTAAGGGCAATGTTATTATGCATCAGTTTGTTTGTAACAAAGAGGGTACTAGGAACAAAAAACATTTGATGAGGATGGATAGGAAAAGAAAACATAGGCCATTAACGCGTTTGGAATGTCAAGCTAAGCTACGAATTCGCTTAGATTATAAGACATCTAAATGGAAAGTGGTTTCTTTTGTGGAGACTCTCAATCATGAGCTTACCCCTTCTACTTTTGTGCACTTACTACCTGGTAATAGAGGGTTGAATAATGCTGATAAAGCCCAAGTAGGGAGGTTGCACGCATATGGTGTTAGAACCTGTCACATAATGGGGTACATGCTGGACCAAAAAGGGGGATATGGTTCCCTTGGGTTTTGTAGAAAGGATCTTTATAATTATATTGAACGACAGAAGCTTGAAAAGATTAAAGATGGGAATGCACATTCTGCCTTATGTTACATACAAGCAAAGGCAAAAAATGATCCCACGCTTTGGGCTAGTTTTCTTGCTTCGGAGGACGGTACTCTGAAGCATTTGTTTTGGGCAGATGGAATTAGTAGGGCTGATTACTACTGCTTTGGGGATGTTTTGGCATTTGACACAACCTATAAGAAAAACAGATATAACAAGCCATTGGTCATTTTTTCTGGTTGTAATCATCATGGTCAGACTGTTGTTTTTGGTTGTGCTTTGGTTTCCAATGAGACGATTGAGACTTACAAGTGA 807 0.3891 MEFASEEHGDIFYRAYAKCHGFVVRKDEISRDFKGNVIMHQFVCNKEGTRNKKHLMRMDRKRKHRPLTRLECQAKLRIRLDYKTSKWKVVSFVETLNHELTPSTFVHLLPGNRGLNNADKAQVGRLHAYGVRTCHIMGYMLDQKGGYGSLGFCRKDLYNYIERQKLEKIKDGNAHSALCYIQAKAKNDPTLWASFLASEDGTLKHLFWADGISRADYYCFGDVLAFDTTYKKNRYNKPLVIFSGCNHHGQTVVFGCALVSNETIETYK. 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g04057 268 PANTHER OS01G0519700 PROTEIN 1 267 - -
Seca9g04057 268 Pfam FAR1 DNA-binding domain 12 101 IPR004330 -
Seca9g04057 268 Pfam MULE transposase domain 223 267 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g04057 Seca-Chr9 90402368 90403174 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca9g04057 FAR1 9.2e-21 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g04057 - - ccaj:109792835 372.474