Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g04040 ATGGACATTGCATCTCTCGAGAAGTTCCTTCAAGAGAGGATTAAGGTTGGTGGCAAGGTCGGTGCTCTCGGCGATACTGTCACTGTTACACACGAGAAGACCAAGATCATTGTCACTTCTGACAGCAACTTCTCCAAACGGTATCTGAAGTACTTGACAAAGAAGTACTTGAAGAAACACAATGTACGGGACTGGCTCAGAGTGATTGCTTCTAACAAAGATAGAAGTATTTATGAATTGAGGTACTTCAACATTGCTGAGAATGAAGGAGAGGAAGAAGATTAA 285 0.4211 MDIASLEKFLQERIKVGGKVGALGDTVTVTHEKTKIIVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRSIYELRYFNIAENEGEEED. 95
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g04040 94 Gene3D - 1 94 IPR038526 -
Seca9g04040 94 PANTHER 60S RIBOSOMAL PROTEIN L22 1 94 IPR002671 GO:0003735|GO:0005840|GO:0006412
Seca9g04040 94 FunFam 60S ribosomal protein L22-2 1 94 - -
Seca9g04040 94 Pfam Ribosomal L22e protein family 1 92 IPR002671 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g04040 Seca-Chr9 89928127 89929788 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g04040 1 94 Cytoplasmic Ribosomal Protein Gene Family AT3G05560 86.170 3.64e-47 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g04040 K02891 - gmx:100790071 169.859