Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g04039 ATGGCCGAGGAGGAGGCGCCTGCGGCCGCTAGTGGCTCAACGACGATGAGCGAAGGAATAAGCGGTGGCTTGCGGCCGTTTCGGACGGCGATGGTGCAGGGGAAGTGGTGCGGTGGCGGCTCGGTGGCACACGACGGTGGCTGCAGACGGTGGCTGGCGCGCAACGGCGGCGGCGCAGAGAGGCTGGCCGCGCACGGCGGCCATGAGAAATTAGAACGTTACACGAAGCCAGTGGAGGACAAGATCATGGACATTGCATCTCTCGAGAAGTTCCTTCAAGAGAGGATTAAGGTTGGTGGCAAGGTCGGTGCTCTCGGCGATACTGTCACTGTTACACACGAGAAGACCAAGATCATTGTCACTTCTGACAGCAACTTCTCCAAACGATTTCCCATTTTTTGCTACCTGGCTCTACTAGTTTGTGTAGCAGGTGCAGACCTGCTTGCCAAATCGTGTACTGGTGTGGCTTTTTCTATTGAGATGTATTCTATGTATCCGGCCAAGCTCTGCTGTAGTGTAACTTTAATGGGTTGGAGTACCTTATCTACTGATGTATATAGGCATGGAAAGAAAATATCAGTGACAATGACCAAAAACTTTGAAAGCGGTGGCTTGCGGCCGTTTCGGACGGCGATGGTGCAGGGGAAGTGGTGCGGTGGCGGCTCGGTGGCACACGACGGTGGCTGCAGACGGTGGCTGGCGCGCAACGGCGGCGGCGCAGAGAGGCTGGCCGCGCACGGCGGCCATGAGGTAAGGGAGTTAGAGAGAGGTCAGAGAGTTTAG 783 0.5645 MAEEEAPAAASGSTTMSEGISGGLRPFRTAMVQGKWCGGGSVAHDGGCRRWLARNGGGAERLAAHGGHEKLERYTKPVEDKIMDIASLEKFLQERIKVGGKVGALGDTVTVTHEKTKIIVTSDSNFSKRFPIFCYLALLVCVAGADLLAKSCTGVAFSIEMYSMYPAKLCCSVTLMGWSTLSTDVYRHGKKISVTMTKNFESGGLRPFRTAMVQGKWCGGGSVAHDGGCRRWLARNGGGAERLAAHGGHEVRELERGQRV. 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g04039 260 Gene3D - 68 165 IPR038526 -
Seca9g04039 260 PANTHER 60S RIBOSOMAL PROTEIN L22 74 130 IPR002671 GO:0003735|GO:0005840|GO:0006412
Seca9g04039 260 Pfam Ribosomal L22e protein family 74 130 IPR002671 GO:0003735|GO:0005840|GO:0006412
Seca9g04039 260 MobiDBLite consensus disorder prediction 1 22 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g04039 Seca-Chr9 89923940 89926849 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g04039 75 129 Cytoplasmic Ribosomal Protein Gene Family AT3G05560 78.182 9.62e-24 91.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g04039 K02891 - psom:113350290 102.834