Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g04026 ATGGCCGCCACCTCAGCAGCTATGGATCAATTTGACGAATCCATGAAGAAACAAATGTCATCACTTTTGTGGGCTATGTTTTTAGTTAAATCCCTCAAAGAGGACAATACTCCTTGTAAAATTGACGAAGGCCTCTTTTTGGGTTCCGTTGGCACTGTGACTAACAAGGATGGTTTGGAAAATGTGAATATCACTCACATTTTGACTGTGGGTGGTAAATTGACACATGCGTATCCTGGGGATTTCGTCTATAAAACTATGGATGTTGCTGACAGAGATGATACCAACTTAAAACAATACTTCAACGAATGTTTTGATTTTATTGATGAAGCCAAAAGACATGGTGGACGGGTTCTGGTTCATTATTATGTTGGTATCCAATCTTTAAAAGCTATCATGGTTATGTACACTGGGAAGAAGAAGATAATTGAAGTTGTTCGGAGTTTACGATTGGTTTTTCCTGCTAGTTTTTACCATGGCTTGATAGTTCATGCAGAGGCTATCAAACAAGGTTTTGATTTAAGTATCTATGTTGGAGTTCTCTGA 546 0.3828 MAATSAAMDQFDESMKKQMSSLLWAMFLVKSLKEDNTPCKIDEGLFLGSVGTVTNKDGLENVNITHILTVGGKLTHAYPGDFVYKTMDVADRDDTNLKQYFNECFDFIDEAKRHGGRVLVHYYVGIQSLKAIMVMYTGKKKIIEVVRSLRLVFPASFYHGLIVHAEAIKQGFDLSIYVGVL. 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g04026 181 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 37 156 IPR029021 -
Seca9g04026 181 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE 19 28 150 - -
Seca9g04026 181 SMART dsp_5 37 167 IPR020422 GO:0006470|GO:0008138
Seca9g04026 181 CDD DSP 38 150 - -
Seca9g04026 181 Pfam Dual specificity phosphatase, catalytic domain 45 136 IPR000340 GO:0008138|GO:0016311
Seca9g04026 181 Gene3D Protein tyrosine phosphatase superfamily 13 162 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g04026 Seca-Chr9 89530585 89531130 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g04026 8 133 Protein tyrosine phosphatase (PTP) family AT3G23610 46.825 1.08e-41 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g04026 - - lang:109352945 182.185