Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g04011 ATGTCATCATCAATGGTTTTCCATTCCCTCAACATTGATATTGAAGAGGTTCAAAGCCCCCAGTCCCACGTTTCGTCTGACCTTAACTCCACAAGTCCTTGGTCACCCACACCTCCAGTAGCTTTATTTGATAATAAAAAGAAGAATGGTGTTAAAAATGGTGTGAAGCGTTGGAAGTATTTTGTTTGCTCAAAAGAAGGTTACAAACCAGATAAGGAAAAAGTTGGGGAACAAAGCAACTCAACTATTAAGTCTAAGAGAAGGAGTCTTACAAGAGAAGGATGCAATGCAAAGTCCGTTTTCAAATTGGTAGGGGAAGGTAAATATGAGCTCATTCGATTTCATGAAAGTCATACACATATACTCGCTTCACCTATGAAGAGACAGTTTCTAAGATCAGCAAGAAAGGTAAATCCTGTTCATAAAAGTTTATTGCATGCATATAGTAGAGCAAATATTGGGCCTTCAAAAACATACCACTTATTGAAAGAACAATTTGGGGGTTATGAAAATGTTGGGTGCACACAAAGGGATCTTCTAAATTATTCAAGAGATTTAAAGACTCTAATTAAAGATTCTGATGCACATGTATTTATTGACAACTTTAGGAGGAAGCAAGAAATTAATCCATCATTCTATTATGCATATGAGGTGGATGAAGAAGGTAGACTAAAACATGTTTTCTGGGCGGATGGCATTTCTAGGAAAAATTATTCCTTATTTGGGGATCTTGTTTCATTTGATACTACATATGAAACAAACAAATATTCAATGATTTTTGCACCATTTACTGGAGTAAACCACCATAGGCAATGTGTTACTTTTGGTGCAGCCTTTTTAGCAGATGAGAAGGCTGAATCATTCATTTGGTTGTTTGAAAAGTTTTTAGAAGCAATGGGGGGAATCAACCAAATCTTTTAA 921 0.3594 MSSSMVFHSLNIDIEEVQSPQSHVSSDLNSTSPWSPTPPVALFDNKKKNGVKNGVKRWKYFVCSKEGYKPDKEKVGEQSNSTIKSKRRSLTREGCNAKSVFKLVGEGKYELIRFHESHTHILASPMKRQFLRSARKVNPVHKSLLHAYSRANIGPSKTYHLLKEQFGGYENVGCTQRDLLNYSRDLKTLIKDSDAHVFIDNFRRKQEINPSFYYAYEVDEEGRLKHVFWADGISRKNYSLFGDLVSFDTTYETNKYSMIFAPFTGVNHHRQCVTFGAAFLADEKAESFIWLFEKFLEAMGGINQIF. 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g04011 306 MobiDBLite consensus disorder prediction 18 46 - -
Seca9g04011 306 MobiDBLite consensus disorder prediction 18 38 - -
Seca9g04011 306 PANTHER OS01G0519700 PROTEIN 53 302 - -
Seca9g04011 306 Pfam MULE transposase domain 245 301 IPR018289 -
Seca9g04011 306 Pfam FAR1 DNA-binding domain 51 122 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g04011 Seca-Chr9 86098693 86099750 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca9g04011 FAR1 8.1e-10 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g04011 - - mtr:112420857 416.772