Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g04007 ATGACTTCTTTCTACTCTTTGCTCTTCATTTCTTCCATTGTGTTGTTTAGTTCACACTCCCATGCCTTTGAGGCACAAGCCAAGCCCCCAGTAGTAGTGAAGGGACTTTCTTTTTCTTTCTATTCCAAAACCTGTCCCAACCTTGAAACCATTGTGAGAAACCATCTCAAGAATGTCTTCAAGCAGGACAATGGCCAAGCTCCTGGCTTACTTCGCATCTTTTTCCATGATTGCTTTGTTCAGGGATGTGATGGGTCGGTGCTGTTGGATGGGAGTCCAGGTGAAAGGGATCAACCAGCCAACGGAGGCATTAGAACTGAGGCCTTGCAGACCATTGATAACATCAGGTCTCTTGTCCACAATCAATGTGGAAGGATCGTCTCCTGTGCTGATATCACTGTCTTGGCTGCTCGTGATGCTGTTTTCCTATCAGGAGGCCCAGATTATGCAGTTCCATTAGGAAGAAGAGATGGCCTAAACTTCAGCACAGCAGGAACAAACAATCTTCCATCACCCTTCAACACAACAAGTGTGACCCTCAAAAATTTTGCATCCAAAAACTTTGATGCCACAGATGTGGTTGCCTTATCAGGTGCACACACATTTGGGCGTGCACATTGTGGCACATTCTTCAATAGGCTTTCCCCTTTAGACCCCAACATGGACAAGACCTTAGCCAATAAACTCAAGGCCACATGCCCAGATGCTAACTCAGGCAACACTGCCAATTTGGACATTAGAACCCCAACACTGTTTGATAACAAATACTTCCTTGACTTAATGAACCGCCAGGGTGTGTTTACCTCTGATCAGGACTTGCTTACGGATAAGAGGACTAAAGGTTTGGTGAATGCCTTTGCAGTTAATCAGACATTGTTCTTTGAGAAGTTTGTGGATGCGGTTATTAGGTTGAGCCAATTGGATGTGTTGACCGGAAATCAAGGTGAAATTCGTGCTAAATGCAATGTCATAAATAGGAAATCTGTGTTGGAAACTGTGGTGGAAGAGGTGGTTCAACTAGCTGATCAGTTTTAA 1035 0.4444 MTSFYSLLFISSIVLFSSHSHAFEAQAKPPVVVKGLSFSFYSKTCPNLETIVRNHLKNVFKQDNGQAPGLLRIFFHDCFVQGCDGSVLLDGSPGERDQPANGGIRTEALQTIDNIRSLVHNQCGRIVSCADITVLAARDAVFLSGGPDYAVPLGRRDGLNFSTAGTNNLPSPFNTTSVTLKNFASKNFDATDVVALSGAHTFGRAHCGTFFNRLSPLDPNMDKTLANKLKATCPDANSGNTANLDIRTPTLFDNKYFLDLMNRQGVFTSDQDLLTDKRTKGLVNAFAVNQTLFFEKFVDAVIRLSQLDVLTGNQGEIRAKCNVINRKSVLETVVEEVVQLADQF. 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g04007 344 SUPERFAMILY Heme-dependent peroxidases 35 325 IPR010255 GO:0004601|GO:0006979|GO:0020037
Seca9g04007 344 CDD secretory_peroxidase 35 324 IPR033905 GO:0004601|GO:0042744
Seca9g04007 344 ProSitePatterns Peroxidases active site signature. 67 78 IPR019794 GO:0004601
Seca9g04007 344 Pfam Peroxidase 52 288 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca9g04007 344 PRINTS Haem peroxidase superfamily signature 127 144 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca9g04007 344 PRINTS Haem peroxidase superfamily signature 145 157 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca9g04007 344 PRINTS Haem peroxidase superfamily signature 67 81 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca9g04007 344 PRINTS Haem peroxidase superfamily signature 245 260 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca9g04007 344 PRINTS Haem peroxidase superfamily signature 192 207 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca9g04007 344 PANTHER - 20 325 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca9g04007 344 FunFam Peroxidase 170 304 - -
Seca9g04007 344 Gene3D Peroxidase, domain 2 171 305 - -
Seca9g04007 344 PRINTS Plant peroxidase signature 45 64 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca9g04007 344 PRINTS Plant peroxidase signature 107 120 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca9g04007 344 PRINTS Plant peroxidase signature 126 136 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca9g04007 344 PRINTS Plant peroxidase signature 243 258 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca9g04007 344 PRINTS Plant peroxidase signature 259 276 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca9g04007 344 PRINTS Plant peroxidase signature 69 89 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca9g04007 344 PRINTS Plant peroxidase signature 191 203 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca9g04007 344 PRINTS Plant peroxidase signature 299 312 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca9g04007 344 PRINTS Plant peroxidase signature 145 160 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca9g04007 344 Gene3D - 40 322 - -
Seca9g04007 344 FunFam Peroxidase 39 180 - -
Seca9g04007 344 ProSitePatterns Peroxidases proximal heme-ligand signature. 192 202 IPR019793 -
Seca9g04007 344 ProSiteProfiles Plant heme peroxidase family profile. 35 325 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g04007 Seca-Chr9 86084309 86089635 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g04007 1 340 Peroxidase AT1G71695 51.821 1.09e-127 368
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g04007 K00430 - gmx:547550 567.385