Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g03963 ATGGATTTCTCTCTGATCATGAATTCCCTAAACACTACTACTGCAATTGGCCTCCTCTCGATAATTTTTCTTTGCTTCTTATTTCTATTTCACCGCTCAAAAGGCAGAGAACCTCCCATGGTTGCAGGTTCCTGGCCTCTACTCGGTCACCTTCCGCTTTTAAGCGGTTCTCAAGCAACCCATCATATTTTGGGTTCCATGGCTGACAAATATGGTCCCCTTTTCATCATCAAGCTTGGTAGCGCACCAACTTTGGTCATCAACAATTGGGAAATTGCCAAGGAATGCTACACCACCAATGACATGGCTGTGTCCTATCGCCCTAACCTCATTGCTGGTGAACACATGACATACAACCAAGCCATGCTTGGTTTCGCACCCTATGGTCCTTATTGGCGTGAAATGCGCAAGATTGTGACTCTAGGGTTCCTCTCCAATCACCGAATTGATTTGCTAAGCCACATTCGAGTCTCGGAGGTGGGGACTTCGATTAAAGAGCTTTTCAATGCTTGGTCACGTGGAAAGGACGGTTCTGATTTTTTGTTGGTGGAGTTGAAGCAGTGGTTCCATGAGTTGGCATTCAACACGGCTCTTCGAATGGTTGCTGGGAAGAGGTATTTTGGGGAAACTGCTGTGGTTAGCAAGGAAGAGGCACAAAAGTGTTTGAAAGCTTTGAGGGAGTTTATGCGTTTGATGGGGGTGTTTACTGTTGCAGATGCTGTTCCTTTTTTGAGGTGGTTTGATTTTGGGGGACATGAGAAGGCCATGAAAGAAAATGTTAAGGAGTTAGATGGCGTTGTGACGGAATGGTTAAGAGAGCACCGAGAGAAGAGGGCTTTAGCTAGTGAGAAGGTTAAAGGAGGTGATCAAGATTTCATGGATGTCATGCTTTCAACTATTGATGGAACAATGATTCATGGGTTTGACTCAGACACCATCAACAAAGCTACAACACTGGCATTAGTTCTGGGAGCAACTGATACTAGTAGTGTTACTCATACCTGGGCAATGTGTTTGCTATTGAATAATCCTCATACATTGGAGAAAGTAAAGGAAGAGATCGATGTCCATATTGGCAAAGAGATATTATGCATAACTGAGTCAGATATAAACAAGTTGGTATACCTTCAAGCTGTTGTTAAAGAGACACTAAGGCTGTATCCAGCATCTCCCCTCTCAGGTGCTCGTGAATTCAGAGAAGATTGTATGTTGGGTGGGTACCATGTGAAGAAGGGAACTCGACTAATCACAAACTTGTGGAAGATCCAAACAGACCCTAGCATGTGGCCAGACCCAATGGAATTTAAGCCAGAGAGGTTCCTTACTACCCATAAGGAAATTGATGTTAAGGGTCAACATTTTGAGTTTTTACCTTTTGGAAGTGGAAGAAGGATATGTCCTGGAATATCATTTGGCCTTCGCACAACTTATTTGACTTTGGCAAATTTTCTGCACTCCTTTGAAGTCTCAAAAGTATCAAGTGAACCCATTGATATGTCTGCTGTCGTAGAAATAACCAACATCAAAGTTACTCCTCTTGAAGTTCTCATCAAACCTCGTTTGTCTCTTAATCATTATGAAACCATGTGA 1590 0.4302 MDFSLIMNSLNTTTAIGLLSIIFLCFLFLFHRSKGREPPMVAGSWPLLGHLPLLSGSQATHHILGSMADKYGPLFIIKLGSAPTLVINNWEIAKECYTTNDMAVSYRPNLIAGEHMTYNQAMLGFAPYGPYWREMRKIVTLGFLSNHRIDLLSHIRVSEVGTSIKELFNAWSRGKDGSDFLLVELKQWFHELAFNTALRMVAGKRYFGETAVVSKEEAQKCLKALREFMRLMGVFTVADAVPFLRWFDFGGHEKAMKENVKELDGVVTEWLREHREKRALASEKVKGGDQDFMDVMLSTIDGTMIHGFDSDTINKATTLALVLGATDTSSVTHTWAMCLLLNNPHTLEKVKEEIDVHIGKEILCITESDINKLVYLQAVVKETLRLYPASPLSGAREFREDCMLGGYHVKKGTRLITNLWKIQTDPSMWPDPMEFKPERFLTTHKEIDVKGQHFEFLPFGSGRRICPGISFGLRTTYLTLANFLHSFEVSKVSSEPIDMSAVVEITNIKVTPLEVLIKPRLSLNHYETM. 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g03963 529 FunFam Cytochrome P450 82C4 30 518 - -
Seca9g03963 529 SUPERFAMILY Cytochrome P450 43 520 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g03963 529 Gene3D Cytochrome P450 30 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g03963 529 PANTHER CYTOCHROME P450 82C3-RELATED 19 526 - -
Seca9g03963 529 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 459 468 IPR017972 GO:0005506|GO:0016705
Seca9g03963 529 PRINTS P450 superfamily signature 457 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g03963 529 PRINTS P450 superfamily signature 378 389 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g03963 529 PRINTS P450 superfamily signature 324 341 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g03963 529 CDD CYP82 72 520 - -
Seca9g03963 529 Pfam Cytochrome P450 44 499 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g03963 529 PRINTS E-class P450 group I signature 68 87 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g03963 529 PRINTS E-class P450 group I signature 466 489 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g03963 529 PRINTS E-class P450 group I signature 418 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g03963 529 PRINTS E-class P450 group I signature 456 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g03963 529 PRINTS E-class P450 group I signature 333 359 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g03963 529 PRINTS E-class P450 group I signature 377 395 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g03963 Seca-Chr9 84214019 84216545 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g03963 16 521 Cytochrome P450 AT4G31940 48.343 1.51e-175 503
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g03963 - - gmx:100802193 749.969