Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g03914 ATGATAATCTCTGCACCGAAAATGACGATTCCGGCACATGCAGCATTTAGCAGCGTTCGATTCGAAAATGTGTCACTGTATGTTGGGGATCTTGAGGGGAATGTGAACGAGACGCAGCTGTATGATCTGTTCAGCCAAGTGGCTCATGTGGTTTCTGCTAGGGTTTGCAGGGATCACACGATGCGATCCTCTCTCGGTTATGCTTATGTGAACTTTTCCAATGCTCAAGATGGTTTGTATTTAGAATTTGATTGA 255 0.4471 MIISAPKMTIPAHAAFSSVRFENVSLYVGDLEGNVNETQLYDLFSQVAHVVSARVCRDHTMRSSLGYAYVNFSNAQDGLYLEFD. 85
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g03914 84 Gene3D - 16 78 IPR012677 -
Seca9g03914 84 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 24 84 IPR000504 GO:0003723
Seca9g03914 84 SUPERFAMILY RNA-binding domain, RBD 13 77 IPR035979 GO:0003676
Seca9g03914 84 SMART rrm1_1 25 84 IPR000504 GO:0003723
Seca9g03914 84 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 26 76 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g03914 Seca-Chr9 82057452 82057706 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g03914 2 77 Eukaryotic Initiation Factors Gene Family AT4G34110 50.000 3.41e-20 81.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g03914 K13126 - gmx:100783163 99.3673