Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g03896 ATGGCAAAGCGAGCAGCACCATCCTCATTTTCCTTCACATGTCAATGGACTTATGATGTCTTCCTCAATTTTAGAGGTGAAGACACACGGCACAATTTCACTGGTACTCTCTATAATGCTCTGCTTGAAAGGGGAATTCACACTTTCATTGATGAAGAAGGGCTTAGAAGAGGGGAAGAAATCACACAAGCTCTTCTCAATGCTATTCAAGAATCTAGAATTGCAATCATTGTTTTCTCTAAGAATTATGCATTTTCAACACATTGTTTGGATGAGCTTGTCCAGATCCTTGAGTCCTTAAAAGCACAAGGTCGATTGGTGTGGCCAATTTTTTATGATGTGGATCCATCACAAGTTCGGTATCAGACAGGGACTTATTCAGAAGCGTTGGCAAAACATGAGGAAAGCTTTCAGAATGACAAGGTGCAGAAATGGAGGAAGGCTTTATGTCAAGCAGCTAATCTATCAGGCTGGCATTTCCAACATGGTTCTGAATCAGAATATAAGTTTATTAAAAAGATTGTTGAAGAGGTCTCAAAAAAGATCAATCACACTCCTTTACATGTTGTTGATCACCCAGTTGGGCTAGAGTCTGTTCTGCAAGAACTGCAATCTCTACTAGGATTTGGGTCTGATGTCAACATGGTAGGCATTTATGGCATTGGTGGAATAGGTAAAACAACAATTGCTCGTGCTGTTTACAACTTGATTGCTGATCAATTTGAAGGTTCATGTTTTCTTGCTGATATTAGAGAAATTGCAGTTAATAAGCATGGTCTTGTACAACTCCAAGAAATGCTACTTTCTGAAATACTCAGGGAGAAAGATATCAAAGTAGGAAATGTCAATCAAGGAATTCCAATAATAAAAAGGAGGCTCCAACAAAAGAAGGTTCTTTTGGTTCTGGATGATGTTGACAAACTGGTGCAGTTAAAGGTACTTGCAGGAGGATATGATTGGTTTGGCTCTGGCAGCAAGATCATCATCACAACAAGAGATAAACAGTTGCTAGATAATCATAGGGTAGTAAAATTACATGAGGTTAAACCATTAAGTGATGAAAAAGCTCTTGAATTGTTCAGTTGGCATGCCTTTAAAAGTAATAAAGTTGATCCAAGTTATGTGGATATTTCAAACCGTGCTGTTTTTTATGCCTGTGGCCTTCCATTGGCTCTGGAGGTGATAGGTTCTCACTTATTTGGTAGAAGTAAAGATGAATGCAATTCTGCATTAGATAAATATGAAAGAGTTCCTCATAAAGAGATACATGAAATTCTTAAAGAAGATGAGAAGGGAATTTTCCTTGACATTGCGTGTTTCTTCAATAAATACGAAATGGACTATGTCAAACAAATGCTATACACTCATGGTTTTCATGCAGAAGATGGTATCAGAGTGTTGGTTGATAGATCTCTTATAAAGATTGATGCTATTGGTTTAGTGAAAATGCATGACTTAATTCAAGACATGGGCAGAGAAATCATAAGGCAAGAGTCAACATATGAGCCTGGTAAACGCAGCAGGTTATGGTTTGAAGGGGATATAATTCATGTTTTGGAAGAAAATACGGGAACTGATAGAATTGAATTCATAAAGCTGGATGCGTGCAACAACAAGGAAGTGCAGTGGAGTGGAAAAGCCTTGAAGAAGATGAAAAACCTGAGAATTCTGATTATTAAAAATGCAGTGTTTTCTACAAGCCCCAAGCATCTACCAAATAGTTTGAGAGTGCTAGATTGGAGTTGTTATCCATCACAGTCTTTACCATCCGATTTCAATCCTAAACAACTTGAGATGCTCCATATGCCTAAAAGTTGCTTTAAATTCTTCCAACCTCCCAAGAGGTTGGAATCCTTAACTTCAATAAGTTTTGAAGATTGCAAGTTCTTAACTGAACTTCCAAGCCTAAGTGCAGCACCATCCTTAATGAACCTGTCCCTTGATAACTGCACAAATTTAGTTAAAGTTCATGATTCTGTTGGGTTTCTTGATAATCTCTGCTACATGAGTGCTAAAAGATGCACCAAGCTAGAAATTCTGGTGCCCTGCATCAAGTTGACATCTCTTGAAATTCTGGATCTCCAAGGGTGCTCAAGCCTTAAGAGATTCCCAGAAGTACTGGAAAAGATGGAGAAAATAAGAGAAATTTATTTATACCATACAGCCATTAACAAATTGCCAATTTCCATTGGAAATCTTGTTGGGCTTGAACTATTATGGCTCATGCAATGTGAAAGGCTAAAACAGTTACCAGCTAGTATCCATATGTTACATAAAGTTGAAGTAGTAGTGGGTTATGGGGATATGAGATTTGGGTATTTTGCAGGGAACCAAGAGAAAGAAAATTTAAGCTTAGAATTAGAAGTATCTCCAAGTGCTATGCTTGTTTATGAAAATGATAAGCTAGATTTTGTTACCCTTGATGTGTATTATCCTTACATGAGTCCCAATAATGTGATCCAAGTAAGTAGTCCCAATCCAATAGTGCATAGTGATTTTGAGTCATTGTTCAGAGAGATGCACAAACACTGGTACTCTGTCTTCTGGAAAACATCAACACGTTTCTCTTTCAGAAAGAAATTCCCTAAGATAGCTGTGTGTTGCTTTGTGATTCCTGGTTTGAAAAAGATCATGATGTTGGATTTCATGTTGAGTGTAGTCATAAATGGCACCAAAGAGTTGAGTTGTTCATGTAACTACATAAGTTGTGCTGCATGGGGCCTGACACTTTGGTGTGATCTAGAGTGCAAAGTGGAGGAGGAAGAAGGGGTGTTTTTTTCAGAGAATGAATGGAATCATGTTGAGATTTTATGTGAAGTGAATGGAACTGAAAGAGTAAGAGCAACTCAAAAGTGGTATGATAGAGAGAGTTTGTGTTGGACCTTAATTGGTGTCTACAAGGAAGGGAACAACATGGAAGATGTTGAATTCAGAAATCCGGATTTTCCATCACCTGCTAGAAAACCTGCATATCCTTTAAGCTGCTGCTCCTATTACACAGTTACACACGCATGGGGAGTCTGGGGACGTCTAAGACAAGGAATTATTTAG 3051 0.3812 MAKRAAPSSFSFTCQWTYDVFLNFRGEDTRHNFTGTLYNALLERGIHTFIDEEGLRRGEEITQALLNAIQESRIAIIVFSKNYAFSTHCLDELVQILESLKAQGRLVWPIFYDVDPSQVRYQTGTYSEALAKHEESFQNDKVQKWRKALCQAANLSGWHFQHGSESEYKFIKKIVEEVSKKINHTPLHVVDHPVGLESVLQELQSLLGFGSDVNMVGIYGIGGIGKTTIARAVYNLIADQFEGSCFLADIREIAVNKHGLVQLQEMLLSEILREKDIKVGNVNQGIPIIKRRLQQKKVLLVLDDVDKLVQLKVLAGGYDWFGSGSKIIITTRDKQLLDNHRVVKLHEVKPLSDEKALELFSWHAFKSNKVDPSYVDISNRAVFYACGLPLALEVIGSHLFGRSKDECNSALDKYERVPHKEIHEILKEDEKGIFLDIACFFNKYEMDYVKQMLYTHGFHAEDGIRVLVDRSLIKIDAIGLVKMHDLIQDMGREIIRQESTYEPGKRSRLWFEGDIIHVLEENTGTDRIEFIKLDACNNKEVQWSGKALKKMKNLRILIIKNAVFSTSPKHLPNSLRVLDWSCYPSQSLPSDFNPKQLEMLHMPKSCFKFFQPPKRLESLTSISFEDCKFLTELPSLSAAPSLMNLSLDNCTNLVKVHDSVGFLDNLCYMSAKRCTKLEILVPCIKLTSLEILDLQGCSSLKRFPEVLEKMEKIREIYLYHTAINKLPISIGNLVGLELLWLMQCERLKQLPASIHMLHKVEVVVGYGDMRFGYFAGNQEKENLSLELEVSPSAMLVYENDKLDFVTLDVYYPYMSPNNVIQVSSPNPIVHSDFESLFREMHKHWYSVFWKTSTRFSFRKKFPKIAVCCFVIPGLKKIMMLDFMLSVVINGTKELSCSCNYISCAAWGLTLWCDLECKVEEEEGVFFSENEWNHVEILCEVNGTERVRATQKWYDRESLCWTLIGVYKEGNNMEDVEFRNPDFPSPARKPAYPLSCCSYYTVTHAWGVWGRLRQGII. 1017
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g03896 1016 ProSiteProfiles TIR domain profile. 16 182 IPR000157 GO:0007165
Seca9g03896 1016 Gene3D - 350 430 IPR042197 -
Seca9g03896 1016 Gene3D - 14 183 IPR035897 -
Seca9g03896 1016 Gene3D Ribonuclease Inhibitor 518 903 IPR032675 -
Seca9g03896 1016 Pfam TIR domain 18 186 IPR000157 GO:0007165
Seca9g03896 1016 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 181 436 IPR027417 -
Seca9g03896 1016 SUPERFAMILY Toll/Interleukin receptor TIR domain 11 158 IPR035897 -
Seca9g03896 1016 Pfam NB-ARC domain 205 401 IPR002182 GO:0043531
Seca9g03896 1016 SUPERFAMILY "Winged helix" DNA-binding domain 423 520 IPR036390 -
Seca9g03896 1016 SMART till_3 17 155 IPR000157 GO:0007165
Seca9g03896 1016 Gene3D - 184 346 IPR027417 -
Seca9g03896 1016 PRINTS Disease resistance protein signature 684 700 - -
Seca9g03896 1016 PRINTS Disease resistance protein signature 292 306 - -
Seca9g03896 1016 PRINTS Disease resistance protein signature 215 230 - -
Seca9g03896 1016 PRINTS Disease resistance protein signature 385 399 - -
Seca9g03896 1016 FunFam Disease resistance protein (TIR-NBS-LRR class) 14 184 - -
Seca9g03896 1016 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 18 765 IPR044974 GO:0006952
Seca9g03896 1016 SUPERFAMILY L domain-like 529 759 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g03896 Seca-Chr9 79135278 79139213 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g03896 12 763 WRKY Transcription Factor Family AT4G12020 33.673 4.40e-102 350
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g03896 - - gmx:100802408 1262.28