Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g03848 ATGGATTTAAATAGTGATGATTCGGCTGTTAATCTGGAAGATGATAGAGACCTAAGTTATAGTGATTCTTCTAGCTTTAGCGATGATGAGAATCATAATGAAAATGATAGAGTAACAGATACTGAGGATGAAGTTAATGAAGAAGAGGTAGACACTGATGAGGTAAATGAATTTATGTATGAAGAAGTTGGAGGGGAGGTTTCAAGGAGGATAATTGATTTGACAAATGATGATATATGGGCATTGGAATTCTGTACTGAAAATGATGCGTTCAATTTTTACTTTTCTTATGCAAAATGTCATGGATTTGCTGTGAGGAGGGATGATGTAATTAAAGACAGTAAAGGTATGGTCATAATGCGACAATTCTTATGTAGTAGGGCTCGTTTGAGGGACAAAAAGCATTTGATTAGATTAGATCGAAAAAAGGAACATAGGCCTCTTACTCGAACAAATTGTCAAGCTAAGTTGAGGGTTCGCTTTGATTATAAGACTGGGAAATTTAAGGTTGTTTCCTTTTTAGACTCTCATAACCATGATTTGACCCCTACTAAATTTGTTCCTTTAATGCCTGCATATCGTGGTTTGAGTGATGGCGACAAAGCCCAAGTTGATGTATTGCATTCTCATGGTGTTAGACCTTGTCAAATAATGGGTTTTCTTGTTGATCAAAAAGGAGGATATAGAAACGTTGGTTTTTCAATGAAAGATTTATACAACTACATAGATGAGGTTAGGAGGGGTAAGATAAAAGATGGGGATGCAGTGGCTGGGTTAAGTTATTTGCAAGGAAAGGCAGATAACAATCCAATGTTTTTTTCAAGATTTTATGTTCTGAGGATGGGAAACTCACTCATCTGTTTTGGTGTGATGAAATAA 879 0.3584 MDLNSDDSAVNLEDDRDLSYSDSSSFSDDENHNENDRVTDTEDEVNEEEVDTDEVNEFMYEEVGGEVSRRIIDLTNDDIWALEFCTENDAFNFYFSYAKCHGFAVRRDDVIKDSKGMVIMRQFLCSRARLRDKKHLIRLDRKKEHRPLTRTNCQAKLRVRFDYKTGKFKVVSFLDSHNHDLTPTKFVPLMPAYRGLSDGDKAQVDVLHSHGVRPCQIMGFLVDQKGGYRNVGFSMKDLYNYIDEVRRGKIKDGDAVAGLSYLQGKADNNPMFFSRFYVLRMGNSLICFGVMK. 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g03848 292 MobiDBLite consensus disorder prediction 1 53 - -
Seca9g03848 292 MobiDBLite consensus disorder prediction 9 39 - -
Seca9g03848 292 Pfam FAR1 DNA-binding domain 92 182 IPR004330 -
Seca9g03848 292 PANTHER OS01G0519700 PROTEIN 81 276 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g03848 Seca-Chr9 75294015 75294893 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca9g03848 FAR1 2.1e-18 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g03848 - - ccaj:109794460 273.863